RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 LNP1A1A4G5 178 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 KHNYNO15037 678 aaKnown RBP18.75■□□□□ 0.59
HMGN1-219ENST00000491183 PON1P27169 355 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 IRX4P78413 519 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 ARHGAP44Q17R89 818 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 DPCR1Q3MIW9 517 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 SPDYCQ5MJ68 293 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 RNF43Q68DV7 783 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 ENOSF1Q7L5Y1 443 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 ANKS1BQ7Z6G8 1248 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 DEFB119Q8N690 84 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 STK32AQ8WU08 396 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 SORCS1Q8WY21 1168 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 AJAP1Q9UKB5 411 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-219ENST00000491183 NAALADL1Q9UQQ1 740 aa18.75■□□□□ 0.59
HMGN1-219ENST00000491183 GON4LQ3T8J9 2241 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 SPTBN2O15020 2390 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 GTPBP10A4D1E9 387 aaKnown RBP18.74■□□□□ 0.59
HMGN1-219ENST00000491183 NPC1O15118 1278 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 ZBTB24O43167 697 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-219ENST00000491183 PAPSS1O43252 624 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-219ENST00000491183 THAP12O43422 761 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 MED7O43513 233 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 NCAM1P13591 858 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 HLA-FP30511 346 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 GNA15P30679 374 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 SLC6A4P31645 630 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 MTIF2P46199 727 aaKnown RBP18.74■□□□□ 0.59
HMGN1-219ENST00000491183 TBX4P57082 545 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 ZNF445P59923 1031 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 RING1Q06587 406 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 ZNF234Q14588 700 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 MEA1Q16626 185 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 EXOC3L4Q17RC7 722 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 FUT11Q495W5 492 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 FAM133BQ5BKY9 247 aaKnown RBP18.74■□□□□ 0.59
HMGN1-219ENST00000491183 SYPL2Q5VXT5 272 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 RFWD3Q6PCD5 774 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 SLC36A4Q6YBV0 504 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 TMEM110Q86TL2 294 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 UNC45BQ8IWX7 931 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 WDTC1Q8N5D0 677 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 DQX1Q8TE96 717 aaKnown RBP18.74■□□□□ 0.59
HMGN1-219ENST00000491183 UCMAQ8WVF2 138 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 SHC3Q92529 594 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 GOLGA1Q92805 767 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 EDEM2Q9BV94 578 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 THAP9Q9H5L6 903 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 SIX2Q9NPC8 291 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 APEX2Q9UBZ4 518 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 CYP8B1Q9UNU6 501 aa18.74■□□□□ 0.59
HMGN1-219ENST00000491183 TIMM44O43615 452 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 ACSL4O60488 711 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 ZNF217O75362 1048 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 ITPKAP23677 461 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 PRKCHP24723 683 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 ACADSBP45954 432 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 RPL6Q02878 288 aaKnown RBP18.73■□□□□ 0.59
HMGN1-219ENST00000491183 EIF4HQ15056 248 aaKnown RBP18.73■□□□□ 0.59
HMGN1-219ENST00000491183 PIK3R6Q5UE93 754 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 LYSMD4Q5XG99 296 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 NUGGCQ68CJ6 796 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 NADSYN1Q6IA69 706 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 KIAA0907Q7Z7F0 614 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-219ENST00000491183 SYT12Q8IV01 421 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 AZIN2Q96A70 460 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 SLC39A13Q96H72 371 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 FCRL2Q96LA5 508 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-219ENST00000491183 FAM81BQ96LP2 452 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 LSM14BQ9BX40 385 aaKnown RBP18.73■□□□□ 0.59
HMGN1-219ENST00000491183 CIPCQ9C0C6 399 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 MKRN2Q9H000 416 aaKnown RBP18.73■□□□□ 0.59
HMGN1-219ENST00000491183 TJP2Q9UDY2 1190 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 PILRBQ9UKJ0 227 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 LAMA1P25391 3075 aa18.73■□□□□ 0.59
HMGN1-219ENST00000491183 NCOR2Q9Y618 2525 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 C4orf47A7E2U8 309 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 E5RJQ4 531 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 CDX4O14627 284 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-219ENST00000491183 AP5Z1O43299 807 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 USP8P40818 1118 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 PI4KAP42356 2102 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 SLC11A2P49281 568 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 TPD52L1Q16890 204 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-219ENST00000491183 DPY19L2P1Q6NXN4 242 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 KIAA1324Q6UXG2 1013 aaKnown RBP18.72■□□□□ 0.59
HMGN1-219ENST00000491183 CLEC17AQ6ZS10 378 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 BEND5Q7L4P6 421 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 ADIPOR2Q86V24 386 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 SLC41A1Q8IVJ1 513 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 ADAM32Q8TC27 787 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 WFDC5Q8TCV5 224 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 DDX1Q92499 740 aaKnown RBP18.72■□□□□ 0.59
HMGN1-219ENST00000491183 FAM149B1Q96BN6 582 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 MYEOVQ96EZ4 313 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 ABCB8Q9NUT2 735 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 EVLQ9UI08 416 aaPredicted RBP18.72■□□□□ 0.59
HMGN1-219ENST00000491183 TLR6Q9Y2C9 796 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 CKAP5Q14008 2032 aa18.72■□□□□ 0.59
HMGN1-219ENST00000491183 ATXN2Q99700 1313 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms