RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PASD1Q8IV76 773 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 FAM160A2Q8N612 972 aaPredicted RBP15.83■□□□□ 0.12
COL27A1-206ENST00000490831 C1orf131Q8NDD1 294 aaKnown RBP15.83■□□□□ 0.12
COL27A1-206ENST00000490831 MDGA1Q8NFP4 955 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 DDI1Q8WTU0 396 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 NOX5Q96PH1 765 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 SLC2A13Q96QE2 648 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 GABRG3Q99928 467 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 BPIFA3Q9BQP9 254 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 ZDHHC4Q9NPG8 344 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 CLEC4EQ9ULY5 219 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 SIK3Q9Y2K2 1263 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 DMXL1Q9Y485 3027 aa15.83■□□□□ 0.12
COL27A1-206ENST00000490831 A0A1W2PQF6 199 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 LGALS16A8MUM7 142 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 NPC1O15118 1278 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 IRAK2O43187 625 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 ACSL4O60488 711 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 JAM2P57087 298 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 SNX16P57768 344 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 ENPP2Q13822 863 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 EIF4HQ15056 248 aaKnown RBP15.82■□□□□ 0.12
COL27A1-206ENST00000490831 TAF5Q15542 800 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 GEN1Q17RS7 908 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 PTPN20Q4JDL3 420 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 EFHC1Q5JVL4 640 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 PIK3R6Q5UE93 754 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 NADSYN1Q6IA69 706 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 OLFML1Q6UWY5 402 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 ANKS1BQ7Z6G8 1248 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-206ENST00000490831 KIAA0907Q7Z7F0 614 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-206ENST00000490831 KBTBD6Q86V97 674 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 C11orf74Q86VG3 221 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 KIAA2013Q8IYS2 634 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL27A1-206ENST00000490831 ANKRD20A12PQ8NF67 263 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 ZNF397Q8NF99 534 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-206ENST00000490831 TMA16Q96EY4 203 aaKnown RBP15.82■□□□□ 0.12
COL27A1-206ENST00000490831 CEP83Q9Y592 693 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 SPTBN4Q9H254 2564 aa15.82■□□□□ 0.12
COL27A1-206ENST00000490831 CAPN9O14815 690 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 EPHB6O15197 1021 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 HSF2BPO75031 334 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 LSM8O95777 96 aaKnown RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 TRUB2O95900 331 aaKnown RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 ERBB2P04626 1255 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 SLC6A4P31645 630 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 GABRB2P47870 512 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 KLK7P49862 253 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 PLK5Q496M5 336 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 USP39Q53GS9 565 aaKnown RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 FAM183BPQ6ZVS7 135 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 SLC26A9Q7LBE3 791 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 ZDHHC17Q8IUH5 632 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 TMEM35BQ8NCS4 154 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 EPS8L1Q8TE68 723 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 DCHS1Q96JQ0 3298 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 ERGIC2Q96RQ1 377 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 ACOX2Q99424 681 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 DDX50Q9BQ39 737 aaKnown RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 NAT10Q9H0A0 1025 aaKnown RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 DUSP15Q9H1R2 295 aaPredicted RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 PARD6AQ9NPB6 346 aa15.81■□□□□ 0.12
COL27A1-206ENST00000490831 THAP10Q9P2Z0 257 aaPredicted RBP15.81■□□□□ 0.12
COL27A1-206ENST00000490831 TCRBV21S2A2A0A5A6 115 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 TIMM44O43615 452 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 TSPAN3O60637 253 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 EPN2O95208 641 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 HOXB2P14652 356 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 SCNN1AP37088 669 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 P2RY2P41231 377 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 SGSHP51688 502 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 PITX1P78337 314 aaPredicted RBP15.8■□□□□ 0.12
COL27A1-206ENST00000490831 SLC6A3Q01959 620 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 E2F5Q15329 346 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 TMEM215Q68D42 235 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 SDE2Q6IQ49 451 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 NOP9Q86U38 636 aaKnown RBP15.8■□□□□ 0.12
COL27A1-206ENST00000490831 ZNF677Q86XU0 584 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 CHPFQ8IZ52 775 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 ADAM32Q8TC27 787 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 IPO4Q8TEX9 1081 aaKnown RBP15.8■□□□□ 0.12
COL27A1-206ENST00000490831 UCMAQ8WVF2 138 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 TPSD1Q9BZJ3 242 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 FAM207AQ9NSI2 230 aaPredicted RBP15.8■□□□□ 0.12
COL27A1-206ENST00000490831 ELOVL2Q9NXB9 296 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 NOCTQ9UK39 431 aaKnown RBP15.8■□□□□ 0.12
COL27A1-206ENST00000490831 PCDHGA5Q9Y5G8 931 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 CEP250Q9BV73 2442 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 SDK1Q7Z5N4 2213 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 PLXND1Q9Y4D7 1925 aa15.8■□□□□ 0.12
COL27A1-206ENST00000490831 GOLGA6L7A0A1B0GV03 622 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 DCLK1O15075 740 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 DAB1O75553 588 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 GABRG2P18507 467 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 HLA-FP30511 346 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 SOX5P35711 763 aa15.79■□□□□ 0.12
COL27A1-206ENST00000490831 POLR2FP61218 127 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms