RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CDY1Q9Y6F8 540 aa5.57□□□□□ -1.52
SSX2IP-208ENST00000490476 PRRC2BQ5JSZ5 2229 aaKnown RBP5.57□□□□□ -1.52
SSX2IP-208ENST00000490476 GBF1Q92538 1859 aa5.57□□□□□ -1.52
SSX2IP-208ENST00000490476 COL1A1P02452 1464 aaPredicted RBP5.57□□□□□ -1.52
SSX2IP-208ENST00000490476 AQP7P3A6NL99 342 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 F5H697 171 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 IPO5O00410 1097 aaKnown RBP5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 FCHO1O14526 889 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 SUN1O94901 812 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 SCAF4O95104 1147 aaKnown RBP5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 SRGAP2BP0DMP2 458 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 ZSCAN22P10073 491 aaPredicted RBP5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 KCNA2P16389 499 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 EGR1P18146 543 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 CD53P19397 219 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 LRPAP1P30533 357 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 OCA2Q04671 838 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 FPGSQ05932 587 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 MYO1EQ12965 1108 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 MAPKAPK3Q16644 382 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 ARL6IP4Q66PJ3 421 aaKnown RBP5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 MMS22LQ6ZRQ5 1243 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 GATAD2AQ86YP4 633 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 MAPKAPK5Q8IW41 473 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 GALNT15Q8N3T1 639 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 CPT1CQ8TCG5 803 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 TMEM171Q8WVE6 324 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 TMEM125Q96AQ2 219 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 RNF31Q96EP0 1072 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 ZSCAN31Q96LW9 406 aaPredicted RBP5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 DEFB118Q96PH6 123 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 ARHGAP39Q9C0H5 1083 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 SLC25A32Q9H2D1 315 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 ZCCHC4Q9H5U6 513 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 CXorf36Q9H7Y0 433 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 DNMT3BQ9UBC3 853 aaKnown RBP5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 TECTAO75443 2155 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 SPEGQ15772 3267 aa5.56□□□□□ -1.52
SSX2IP-208ENST00000490476 CHD7Q9P2D1 2997 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 HMX3A6NHT5 357 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 EIF3FO00303 357 aaPredicted RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 IRAK2O43187 625 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 KCNQ3O43525 872 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 PRICKLE3O43900 615 aaPredicted RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 PYGLP06737 847 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 ALADP13716 330 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 HGFP14210 728 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 NDUFV1P49821 464 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 DGKEP52429 567 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 SHHQ15465 462 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 TAF12Q16514 161 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 ZNF750Q32MQ0 723 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 C9orf50Q5SZB4 431 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 LIN54Q6MZP7 749 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 RGS7BPQ6MZT1 257 aaPredicted RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 MRNIPQ6NTE8 343 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 USP17L6PQ6QN14 398 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 KLHL17Q6TDP4 642 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 ASCL5Q7RTU5 278 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 CLNKQ7Z7G1 428 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 CCDC117Q8IWD4 279 aaPredicted RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 CLASRPQ8N2M8 674 aaKnown RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 RAET1EQ8TD07 263 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 GRAMD1AQ96CP6 724 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 FAM89AQ96GI7 184 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 MED15Q96RN5 788 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 DCLRE1CQ96SD1 692 aaKnown RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 PRRX2Q99811 253 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 PTDSS2Q9BVG9 487 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 MAF1Q9H063 256 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 MLXIPQ9HAP2 919 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 PRDM16Q9HAZ2 1276 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 SERTAD3Q9UJW9 196 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 NDRG4Q9ULP0 352 aaKnown RBP5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 CAPN11Q9UMQ6 739 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 MAP3K2Q9Y2U5 619 aa5.55□□□□□ -1.52
SSX2IP-208ENST00000490476 XDHP47989 1333 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 FRYQ5TBA9 3013 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 CCNT2O60583 730 aaKnown RBP5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 ZNF623O75123 536 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 ITGA5P08648 1049 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 NPPBP16860 134 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 CD6P30203 668 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 NTSR1P30989 418 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 NPTX2P47972 431 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 ANXA11P50995 505 aaKnown RBP5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 ARL4CP56559 192 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 FOXO1Q12778 655 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 GPS1Q13098 491 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 TNIP1Q15025 636 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 GEN1Q17RS7 908 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 FBLN7Q53RD9 439 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 RBM20Q5T481 1227 aaKnown RBP5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 ZFYVE27Q5T4F4 411 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 VPS53Q5VIR6 699 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 MANEALQ5VSG8 457 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 TBC1D9BQ66K14 1250 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 Q6ZSN1 163 aa5.54□□□□□ -1.52
SSX2IP-208ENST00000490476 RFX8Q6ZV50 586 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 552.4 ms