RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 HDCP19113 662 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 ABCD3P28288 659 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 RGS2P41220 211 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 PHKA1P46020 1223 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 ARFIP2P53365 341 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 COPAP53621 1224 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 POU6F2P78424 691 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TRPC3Q13507 836 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 HLXQ14774 488 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TBCCQ15814 346 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 SNX30Q5VWJ9 437 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 ZNF788Q6ZQV5 615 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 DENND5BQ6ZUT9 1274 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TTC7BQ86TV6 843 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 MICU3Q86XE3 530 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 AOPEPQ8N6M6 819 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 B3GALNT2Q8NCR0 500 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 POC1BQ8TC44 478 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 AFG1LQ8WV93 481 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 SNX22Q96L94 193 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 MYCBPQ99417 103 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 MPHOSPH8Q99549 860 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 SMOQ99835 787 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 C1orf43Q9BWL3 253 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 TXLNGYQ9BZA5 131 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 XPO4Q9C0E2 1151 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 ARHGAP39Q9C0H5 1083 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 SMOC2Q9H3U7 446 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 SMURF2Q9HAU4 748 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 SLAMF7Q9NQ25 335 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 VPS28Q9UK41 221 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 ZNF711Q9Y462 761 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 CFAP20Q9Y6A4 193 aaKnown RBP3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 PIAS3Q9Y6X2 628 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 KIAA0586Q9BVV6 1533 aa3.53□□□□□ -1.84
DEPDC1-204ENST00000489862 PRG4Q92954 1404 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 C17orf113A0A1B0GUU1 675 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 GTPBP10A4D1E9 387 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ZNF785A8K8V0 405 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ISM1B1AKI9 464 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 B4DLN1 442 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 F5H697 171 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 POLRMTO00411 1230 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 TGDSO95455 350 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 MT-ND5P03915 603 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ANXA1P04083 346 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RPLP2P05387 115 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 GJB1P08034 283 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RHOP08100 348 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RPL17P18621 184 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 EN2P19622 333 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ATICP31939 592 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 CTNNA1P35221 906 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 PIK3CAP42336 1068 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 PSMC6P62333 389 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 TLE2Q04725 743 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 UBE3AQ05086 875 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 CDC16Q13042 620 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RILPL1Q5EBL4 403 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RUSC1-AS1Q66K80 236 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ACAD10Q6JQN1 1059 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 SLC30A6Q6NXT4 461 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 UNC13DQ70J99 1090 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 AMIGO2Q86SJ2 522 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 VSIG1Q86XK7 387 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 GALNT4Q8N4A0 578 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RUBCNQ92622 972 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ZC3H10Q96K80 434 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 C7orf26Q96N11 449 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 JAKMIP1Q96N16 626 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 GPR63Q9BZJ6 419 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 CCDC68Q9H2F9 335 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 PABPC3Q9H361 631 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 JMJD4Q9H9V9 463 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 KRT84Q9NSB2 600 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 NSMCE4AQ9NXX6 385 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 TMOD4Q9NZQ9 345 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 AFF4Q9UHB7 1163 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ADAM21Q9UKJ8 722 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 AGAP1Q9UPQ3 857 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 DISP1Q96F81 1524 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ADGRA2Q96PE1 1338 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 CUL7Q14999 1698 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 hCG_1807616A0A1W2PRN6 198 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 WDR27A2RRH5 827 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 PABPN1LA6NDY0 278 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 CGB1A6NKQ9 187 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 E7ENX8 843 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 F5H0A9 414 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 H7C0S8 307 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 RTCAO00442 366 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 SLC7A4O43246 635 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 VPS4BO75351 444 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ERAL1O75616 437 aaKnown RBP3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 USP1O94782 785 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 STARD3NLO95772 234 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 BMP15O95972 392 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 ITGA5P08648 1049 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 GNAI3P08754 354 aa3.52□□□□□ -1.85
DEPDC1-204ENST00000489862 CSF1P09603 554 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms