RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 TRIM55Q9BYV6 548 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 LTB4R2Q9NPC1 389 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 TRPV5Q9NQA5 729 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 TOPORSQ9NS56 1045 aaPredicted RBP6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 SLC38A7Q9NVC3 462 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 FBXL5Q9UKA1 691 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 FBXO4Q9UKT5 387 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 MRPS23Q9Y3D9 190 aaKnown RBP6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 PHLPP2Q6ZVD8 1323 aa6.93□□□□□ -1.3
PRPF40A-210ENST00000489741 EPG5Q9HCE0 2579 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 MTCL1Q9Y4B5 1905 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TTC26A0AVF1 554 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 M0QZQ0 153 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 SLC16A4O15374 487 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TOM1L1O75674 476 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 OAZ2O95190 189 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 VNN2O95498 520 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 SCG5P05408 212 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 ADRB2P07550 413 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TDGF1P13385 188 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 CEBPBP17676 345 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 CD72P21854 359 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 LRPAP1P30533 357 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 MC3RP41968 323 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 AARSP49588 968 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 GFRA1P56159 465 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 OSTNP61366 133 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 MCL1Q07820 350 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 DMP1Q13316 513 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 VMACQ2NL98 169 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 FAM78AQ5JUQ0 283 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 ZBTB41Q5SVQ8 909 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 KRT79Q5XKE5 535 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 SYT2Q8N9I0 419 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 PLEKHO2Q8TD55 490 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 ING5Q8WYH8 240 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 RUBCNQ92622 972 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TCEAL4Q96EI5 215 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 DRC1Q96MC2 740 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 ZSWIM3Q96MP5 696 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 KXD1Q9BQD3 176 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 PLEKHA5Q9HAU0 1116 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TRPV4Q9HBA0 871 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 KMT5AQ9NQR1 393 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 DLL3Q9NYJ7 618 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 CEP72Q9P209 647 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 AFF4Q9UHB7 1163 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TMEFF2Q9UIK5 374 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 NOL7Q9UMY1 257 aaKnown RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TIMM13Q9Y5L4 95 aaPredicted RBP6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 NOTCH4Q99466 2003 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 ARID2Q68CP9 1835 aa6.92□□□□□ -1.3
PRPF40A-210ENST00000489741 TPRP12270 2363 aaKnown RBP6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 H7C4K7 107 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ARNTLO00327 626 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ZNF197O14709 1029 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 KLF4O43474 513 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 LAMTOR5O43504 91 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 FAM189A1O60320 539 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 TRIM13O60858 407 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 STK10O94804 968 aaKnown RBP6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 CYP3A5P20815 502 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 TGM1P22735 817 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 FPR2P25090 351 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ELF1P32519 619 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 SLC12A3P55017 1021 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 MLLT6P55198 1093 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 PPP2R2AP63151 447 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ATP2C1P98194 919 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ADCY1Q08828 1119 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 UBXN2BQ14CS0 331 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ACBD5Q5T8D3 534 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ZNF852Q6ZMS4 543 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 TTLL10Q6ZVT0 673 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 CCDC103Q8IW40 242 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 DCLK2Q8N568 766 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 TMEM145Q8NBT3 493 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 KCNG4Q8TDN1 519 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 DNASE1L2Q92874 299 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 RAB34Q9BZG1 259 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 CYP4F11Q9HBI6 524 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ZFP14Q9HCL3 533 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 PARD6AQ9NPB6 346 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 PRMT8Q9NR22 394 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 HEBP1Q9NRV9 189 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 ZSCAN32Q9NX65 697 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 KCND2Q9NZV8 630 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 KCNG1Q9UIX4 513 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 PCDHGA2Q9Y5H1 932 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 INSL5Q9Y5Q6 135 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 PMF1-BGLAPU3KQ54 211 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 SPTBN2O15020 2390 aa6.91□□□□□ -1.3
PRPF40A-210ENST00000489741 VWA8A3KMH1 1905 aa6.9□□□□□ -1.3
PRPF40A-210ENST00000489741 TDRD15B5MCY1 1934 aaKnown RBP6.9□□□□□ -1.3
PRPF40A-210ENST00000489741 MAN2B1O00754 1011 aa6.9□□□□□ -1.3
PRPF40A-210ENST00000489741 PRRG1O14668 218 aa6.9□□□□□ -1.3
PRPF40A-210ENST00000489741 NCAM2O15394 837 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms