RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 MARCH2Q9P0N8 246 aa17.78■□□□□ 0.44
TOP3B-217ENST00000489581 KIAA1522Q9P206 1035 aaPredicted RBP17.78■□□□□ 0.44
TOP3B-217ENST00000489581 STRIP2Q9ULQ0 834 aa17.78■□□□□ 0.44
TOP3B-217ENST00000489581 SLCO1B1Q9Y6L6 691 aa17.78■□□□□ 0.44
TOP3B-217ENST00000489581 ITPR1Q14643 2758 aa17.78■□□□□ 0.44
TOP3B-217ENST00000489581 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.44
TOP3B-217ENST00000489581 ATXN1LP0C7T5 689 aaKnown RBP17.77■□□□□ 0.44
TOP3B-217ENST00000489581 EIF4HQ15056 248 aaKnown RBP17.77■□□□□ 0.44
TOP3B-217ENST00000489581 MARCH9Q86YJ5 346 aa17.77■□□□□ 0.44
TOP3B-217ENST00000489581 CPXM2Q8N436 756 aa17.77■□□□□ 0.44
TOP3B-217ENST00000489581 SLC2A11Q9BYW1 496 aa17.77■□□□□ 0.44
TOP3B-217ENST00000489581 C6orf106Q9H6K1 298 aaPredicted RBP17.77■□□□□ 0.44
TOP3B-217ENST00000489581 TOR4AQ9NXH8 423 aa17.77■□□□□ 0.44
TOP3B-217ENST00000489581 RAXQ9Y2V3 346 aa17.77■□□□□ 0.44
TOP3B-217ENST00000489581 ACSL1P33121 698 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 YWHAGP61981 247 aaKnown RBP eCLIP17.76■□□□□ 0.43
TOP3B-217ENST00000489581 E2F5Q15329 346 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 SOWAHCQ53LP3 525 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-217ENST00000489581 DBX2Q6ZNG2 339 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 TMPRSS7Q7RTY8 843 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 ZNF366Q8N895 744 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 BAHD1Q8TBE0 780 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-217ENST00000489581 CDC6Q99741 560 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 ARID3AQ99856 593 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 DNAI2Q9GZS0 605 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 TRAF3IP3Q9Y228 551 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 BTBD3Q9Y2F9 522 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 TP53BP1Q12888 1972 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-217ENST00000489581 LOC400499M0QZD8 3231 aa17.76■□□□□ 0.43
TOP3B-217ENST00000489581 MAPK13O15264 365 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 FLRT2O43155 660 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 TIMM44O43615 452 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 TSPAN3O60637 253 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 F13A1P00488 732 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 ZSCAN22P10073 491 aaPredicted RBP17.75■□□□□ 0.43
TOP3B-217ENST00000489581 KRT13P13646 458 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 NR2F2P24468 414 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 KIF19Q2TAC6 998 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
TOP3B-217ENST00000489581 INTS8Q75QN2 995 aaKnown RBP17.75■□□□□ 0.43
TOP3B-217ENST00000489581 PIGZQ86VD9 579 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 ARHGAP18Q8N392 663 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 CCDC150Q8NCX0 1101 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 OR2T3Q8NH03 318 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 CYB5D2Q8WUJ1 264 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 NDRG1Q92597 394 aaKnown RBP17.75■□□□□ 0.43
TOP3B-217ENST00000489581 LHX5Q9H2C1 402 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.75■□□□□ 0.43
TOP3B-217ENST00000489581 PCDHGB2Q9Y5G2 931 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 SNX11Q9Y5W9 270 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 IGSF10Q6WRI0 2623 aa17.75■□□□□ 0.43
TOP3B-217ENST00000489581 A0A1B0GVL5 298 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 KCNK3O14649 394 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 HOXD9P28356 352 aaPredicted RBP17.74■□□□□ 0.43
TOP3B-217ENST00000489581 AFF3P51826 1226 aaKnown RBP17.74■□□□□ 0.43
TOP3B-217ENST00000489581 CAMK2GQ13555 558 aaPredicted RBP17.74■□□□□ 0.43
TOP3B-217ENST00000489581 RAB41Q5JT25 222 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 FAM217AQ8IXS0 508 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 FAM186BQ8IYM0 893 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 SLC4A11Q8NBS3 891 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 SEMA4DQ92854 862 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 PLD4Q96BZ4 506 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 UBXN6Q9BZV1 441 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 PCED1AQ9H1Q7 454 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 MAPK8IP1Q9UQF2 711 aa17.74■□□□□ 0.43
TOP3B-217ENST00000489581 SHROOM3Q8TF72 1996 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 DKK1O94907 266 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 HLA-FP30511 346 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TKTL1P51854 596 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 RAD23BP54727 409 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 DNM1Q05193 864 aaKnown RBP17.73■□□□□ 0.43
TOP3B-217ENST00000489581 CYP4F3Q08477 520 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 SUZ12Q15022 739 aaKnown RBP17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TEAD4Q15561 434 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TRIP4Q15650 581 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-217ENST00000489581 MPPE1Q53F39 396 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 CCDC157Q569K6 752 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 LAYNQ6UX15 382 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 CHST9Q7L1S5 443 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 FMNL3Q8IVF7 1028 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TMEM176AQ96HP8 235 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 ULBP1Q9BZM6 244 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TMEM245Q9H330 911 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TMEM8AQ9HCN3 771 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 TM9SF3Q9HD45 589 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 RCOR1Q9UKL0 485 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 CFAP45Q9UL16 551 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 ANKRD6Q9Y2G4 727 aa17.73■□□□□ 0.43
TOP3B-217ENST00000489581 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-217ENST00000489581 MUC22E2RYF6 1773 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-217ENST00000489581 TRABD2BA6NFA1 517 aa17.72■□□□□ 0.43
TOP3B-217ENST00000489581 TULP2O00295 520 aa17.72■□□□□ 0.43
TOP3B-217ENST00000489581 ZBED1O96006 694 aa17.72■□□□□ 0.43
TOP3B-217ENST00000489581 PFKFB1P16118 471 aa17.72■□□□□ 0.43
TOP3B-217ENST00000489581 PSMC2P35998 433 aaKnown RBP17.72■□□□□ 0.43
TOP3B-217ENST00000489581 HARS2P49590 506 aaKnown RBP17.72■□□□□ 0.43
TOP3B-217ENST00000489581 ADAM9Q13443 819 aa17.72■□□□□ 0.43
TOP3B-217ENST00000489581 NFIL3Q16649 462 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms