RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
HDAC6-233ENST00000489352 RAB34Q9BZG1 259 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 ZNF768Q9H5H4 540 aaKnown RBP12.15□□□□□ -0.46
HDAC6-233ENST00000489352 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 GDAP2Q9NXN4 497 aa12.15□□□□□ -0.46
HDAC6-233ENST00000489352 DOCK9Q9BZ29 2069 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 A0A1W2PR77 199 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 TLR5O60602 858 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
HDAC6-233ENST00000489352 CYBBP04839 570 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 SCP2P22307 547 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 LMO2P25791 158 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 TRIM29Q14134 588 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 MORC3Q14149 939 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 SOWAHAQ2M3V2 549 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 KRT79Q5XKE5 535 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 ZNF776Q68DI1 518 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-233ENST00000489352 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 SLFN12LQ6IEE8 588 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 MFSD2AQ8NA29 543 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 MOCOSQ96EN8 888 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 CRTAC1Q9NQ79 661 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 CYLDQ9NQC7 956 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 AGO2Q9UKV8 859 aaKnown RBP12.14□□□□□ -0.47
HDAC6-233ENST00000489352 SCML1Q9UN30 329 aa12.14□□□□□ -0.47
HDAC6-233ENST00000489352 CSMD1Q96PZ7 3565 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 A1L4Q6 167 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 K7ENM7 598 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 CHKAP35790 457 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 ATP5C1P36542 298 aaKnown RBP12.13□□□□□ -0.47
HDAC6-233ENST00000489352 NCKAP1LP55160 1127 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 RBP5P82980 135 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 KCNAB2Q13303 367 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 CLCA4Q14CN2 919 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 ZRSR1Q15695 479 aaKnown RBP12.13□□□□□ -0.47
HDAC6-233ENST00000489352 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 RBM44Q6ZP01 1051 aaKnown RBP12.13□□□□□ -0.47
HDAC6-233ENST00000489352 USP30Q70CQ3 517 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 OR2T34Q8NGX1 318 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 OMDQ99983 421 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 SNX25Q9H3E2 840 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 EBF2Q9HAK2 575 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 USP29Q9HBJ7 922 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 ITGA11Q9UKX5 1188 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 TPX2Q9ULW0 747 aaKnown RBP12.13□□□□□ -0.47
HDAC6-233ENST00000489352 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 ENTPD2Q9Y5L3 495 aa12.13□□□□□ -0.47
HDAC6-233ENST00000489352 WNT9AO14904 365 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 PIGRP01833 764 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 SLC5A2P31639 672 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 CCR5P51681 352 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 OXCT1P55809 520 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 CYP4F2P78329 520 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 TOB2Q14106 344 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-233ENST00000489352 STAT4Q14765 748 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 TGIF1Q15583 401 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 ZNF174Q15697 407 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 BORAQ6PGQ7 559 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 TICAM1Q8IUC6 712 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 DIS3L2Q8IYB7 885 aaKnown RBP12.12□□□□□ -0.47
HDAC6-233ENST00000489352 SLC25A45Q8N413 288 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 ARRDC3Q96B67 414 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 PRR11Q96HE9 360 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-233ENST00000489352 PIWIL1Q96J94 861 aaKnown RBP12.12□□□□□ -0.47
HDAC6-233ENST00000489352 APOLD1Q96LR9 279 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 KLF16Q9BXK1 252 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-233ENST00000489352 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
HDAC6-233ENST00000489352 SUN2Q9UH99 717 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
HDAC6-233ENST00000489352 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 A0A1W2PNU3 283 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 NEMP2A6NFY4 417 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 RNASEH2AO75792 299 aaKnown RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 TBX18O95935 607 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 TGM2P21980 687 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 DGKAP23743 735 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 ABCD1P33897 745 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 POU5F1Q01860 360 aaKnown RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 OVGP1Q12889 678 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 PRPF39Q86UA1 669 aaKnown RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 IQCHQ86VS3 1027 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 SPATS2Q86XZ4 545 aaKnown RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 C1orf127Q8N9H9 656 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 SCAMP5Q8TAC9 235 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 DDI1Q8WTU0 396 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
HDAC6-233ENST00000489352 PABPC3Q9H361 631 aaKnown RBP12.11□□□□□ -0.47
HDAC6-233ENST00000489352 PRSS16Q9NQE7 514 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms