RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 CRELD1Q96HD1 420 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 CDC6Q99741 560 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 C6orf106Q9H6K1 298 aaPredicted RBP11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 PNPLA8Q9NP80 782 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 ZNF510Q9Y2H8 683 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 SNX11Q9Y5W9 270 aa11.33□□□□□ -0.6
PTP4A2-206ENST00000489313 TRABD2BA6NFA1 517 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 KCNK3O14649 394 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 DKK1O94907 266 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 NR3C1P04150 777 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 RALAP11233 206 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 TRIM21P19474 475 aaKnown RBP11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 ACSL1P33121 698 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 PSEN1P49768 467 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 AFF3P51826 1226 aaKnown RBP11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 COG7P83436 770 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 LAYNQ6UX15 382 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 DBX2Q6ZNG2 339 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 ZNF366Q8N895 744 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 DDI1Q8WTU0 396 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 CLIC5Q9NZA1 410 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 PCDHGB2Q9Y5G2 931 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 USP3Q9Y6I4 520 aa11.32□□□□□ -0.6
PTP4A2-206ENST00000489313 ZNF462Q96JM2 2506 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 SHROOM3Q8TF72 1996 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 MUC22E2RYF6 1773 aaPredicted RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 SLC12A8A0AV02 714 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 KLRC4O43908 158 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ZIC2O95409 532 aaPredicted RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 YEATS4O95619 227 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 CYBBP04839 570 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 EMP3P54852 163 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ARID5AQ03989 594 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 EIF4HQ15056 248 aaKnown RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ZNF394Q53GI3 561 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ZNF276Q8N554 614 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 OR2T3Q8NH03 318 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 CDK5RAP1Q96SZ6 601 aaKnown RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 DUSP16Q9BY84 665 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 KCTD10Q9H3F6 313 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 TM9SF3Q9HD45 589 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 DKK4Q9UBT3 224 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.31□□□□□ -0.6
PTP4A2-206ENST00000489313 MAST4O15021 2626 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 IKBKBO14920 756 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 TSPAN3O60637 253 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 TRIM49P0CI25 452 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 TRIM49CP0CI26 452 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 IL9RQ01113 521 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 SUZ12Q15022 739 aaKnown RBP11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 FNDC3BQ53EP0 1204 aaKnown RBP11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 KCNT1Q5JUK3 1230 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 RSRC2Q7L4I2 434 aaKnown RBP11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 GALNT15Q8N3T1 639 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 CPXM2Q8N436 756 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 TAS1R2Q8TE23 839 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 ARID3AQ99856 593 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 IMPG2Q9BZV3 1241 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 CYP3A43Q9HB55 503 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
PTP4A2-206ENST00000489313 EIF4E1BA6NMX2 242 aaKnown RBP11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 H0Y8X5 98 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 PDXKO00764 312 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 FSBPO95073 299 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 SEMA4FO95754 770 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 ME1P48163 572 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 GCLMP48507 274 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 VAMP7P51809 220 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 CAMK2GQ13555 558 aaPredicted RBP11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 E2F5Q15329 346 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 TEAD4Q15561 434 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 PTPRNQ16849 979 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 DHRS13Q6UX07 377 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 TMEM174Q8WUU8 243 aa11.29□□□□□ -0.6
PTP4A2-206ENST00000489313 NDRG1Q92597 394 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms