RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 MPPE1Q53F39 396 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 FAM133BQ5BKY9 247 aaKnown RBP22.02■■□□□ 1.12
LIME1-207ENST00000489212 NADSYN1Q6IA69 706 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 RFWD3Q6PCD5 774 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 FAM183BPQ6ZVS7 135 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 APTXQ7Z2E3 356 aaKnown RBP22.02■■□□□ 1.12
LIME1-207ENST00000489212 CACNA2D4Q7Z3S7 1137 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 TRMT11Q7Z4G4 463 aaKnown RBP22.02■■□□□ 1.12
LIME1-207ENST00000489212 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.02■■□□□ 1.12
LIME1-207ENST00000489212 UNC45BQ8IWX7 931 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 AOPEPQ8N6M6 819 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 PARD6AQ9NPB6 346 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 INVSQ9Y283 1065 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 TLR6Q9Y2C9 796 aa22.02■■□□□ 1.12
LIME1-207ENST00000489212 A0A1W2PQF6 199 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 CAPN9O14815 690 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 ACSL4O60488 711 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 IGLV3-25P01717 112 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 RETP07949 1114 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 TPM2P07951 284 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 NTSR1P30989 418 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 ANO6Q4KMQ2 910 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 FKBP15Q5T1M5 1219 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 TAF3Q5VWG9 929 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 OLFML1Q6UWY5 402 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 NOP9Q86U38 636 aaKnown RBP22.01■■□□□ 1.11
LIME1-207ENST00000489212 AZIN2Q96A70 460 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 TMA16Q96EY4 203 aaKnown RBP22.01■■□□□ 1.11
LIME1-207ENST00000489212 MYEOVQ96EZ4 313 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 NOX5Q96PH1 765 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 SLC2A13Q96QE2 648 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 TRIM62Q9BVG3 475 aa22.01■■□□□ 1.11
LIME1-207ENST00000489212 FAM207AQ9NSI2 230 aaPredicted RBP22.01■■□□□ 1.11
LIME1-207ENST00000489212 TCRBV21S2A2A0A5A6 115 aa22■■□□□ 1.11
LIME1-207ENST00000489212 LRRC10BA6NIK2 292 aa22■■□□□ 1.11
LIME1-207ENST00000489212 LGALS16A8MUM7 142 aa22■■□□□ 1.11
LIME1-207ENST00000489212 IRAK2O43187 625 aa22■■□□□ 1.11
LIME1-207ENST00000489212 GRAP2O75791 330 aa22■■□□□ 1.11
LIME1-207ENST00000489212 TRUB2O95900 331 aaKnown RBP22■■□□□ 1.11
LIME1-207ENST00000489212 ATP1A3P13637 1013 aa22■■□□□ 1.11
LIME1-207ENST00000489212 HOXB2P14652 356 aa22■■□□□ 1.11
LIME1-207ENST00000489212 CDH5P33151 784 aaPredicted RBP22■■□□□ 1.11
LIME1-207ENST00000489212 SLC11A2P49281 568 aa22■■□□□ 1.11
LIME1-207ENST00000489212 POLR2FP61218 127 aaKnown RBP22■■□□□ 1.11
LIME1-207ENST00000489212 EIF4EBP2Q13542 120 aaPredicted RBP22■■□□□ 1.11
LIME1-207ENST00000489212 PIK3R6Q5UE93 754 aa22■■□□□ 1.11
LIME1-207ENST00000489212 TMEM215Q68D42 235 aa22■■□□□ 1.11
LIME1-207ENST00000489212 OR6B2Q6IFH4 312 aa22■■□□□ 1.11
LIME1-207ENST00000489212 CHPFQ8IZ52 775 aa22■■□□□ 1.11
LIME1-207ENST00000489212 DEFB106AQ8N104 65 aa22■■□□□ 1.11
LIME1-207ENST00000489212 HMGB4Q8WW32 186 aa22■■□□□ 1.11
LIME1-207ENST00000489212 ERLEC1Q96DZ1 483 aa22■■□□□ 1.11
LIME1-207ENST00000489212 GABRG3Q99928 467 aa22■■□□□ 1.11
LIME1-207ENST00000489212 SLC2A11Q9BYW1 496 aa22■■□□□ 1.11
LIME1-207ENST00000489212 CD248Q9HCU0 757 aa22■■□□□ 1.11
LIME1-207ENST00000489212 POLMQ9NP87 494 aaPredicted RBP22■■□□□ 1.11
LIME1-207ENST00000489212 ASNSD1Q9NWL6 643 aa22■■□□□ 1.11
LIME1-207ENST00000489212 CACNA2D2Q9NY47 1150 aa22■■□□□ 1.11
LIME1-207ENST00000489212 XPO7Q9UIA9 1087 aaKnown RBP22■■□□□ 1.11
LIME1-207ENST00000489212 RALGAPA1Q6GYQ0 2036 aa22■■□□□ 1.11
LIME1-207ENST00000489212 DNAH14Q0VDD8 3507 aa22■■□□□ 1.11
LIME1-207ENST00000489212 FAM170AA1A519 330 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 WASH3PC4AMC7 463 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 ALDH1A2O94788 518 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 GLI1P08151 1106 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 JAM2P57087 298 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 ZNF445P59923 1031 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 SPEM2Q0P670 501 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 SYCP1Q15431 976 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 PLK5Q496M5 336 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 DCAF6Q58WW2 860 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 ZC3H12AQ5D1E8 599 aaKnown RBP21.99■■□□□ 1.11
LIME1-207ENST00000489212 RNF43Q68DV7 783 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 KIAA1211LQ6NV74 962 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 ANKS1BQ7Z6G8 1248 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 OLIG1Q8TAK6 271 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 EPS8L1Q8TE68 723 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 ZC3H10Q96K80 434 aaKnown RBP21.99■■□□□ 1.11
LIME1-207ENST00000489212 PRICKLE1Q96MT3 831 aaPredicted RBP21.99■■□□□ 1.11
LIME1-207ENST00000489212 DUSP15Q9H1R2 295 aaPredicted RBP21.99■■□□□ 1.11
LIME1-207ENST00000489212 NLRC4Q9NPP4 1024 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 CEP83Q9Y592 693 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 RAD54BQ9Y620 910 aa21.99■■□□□ 1.11
LIME1-207ENST00000489212 HSF2BPO75031 334 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 GFPT2O94808 682 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 MOCS2O96007 188 aaPredicted RBP21.98■■□□□ 1.11
LIME1-207ENST00000489212 CDK11BP21127 795 aaKnown RBP21.98■■□□□ 1.11
LIME1-207ENST00000489212 HLA-FP30511 346 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 SLC6A3Q01959 620 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 USP39Q53GS9 565 aaKnown RBP21.98■■□□□ 1.11
LIME1-207ENST00000489212 EFHC1Q5JVL4 640 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 DHX40Q8IX18 779 aaKnown RBP21.98■■□□□ 1.11
LIME1-207ENST00000489212 TMEM35BQ8NCS4 154 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 ANKRD20A12PQ8NF67 263 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 WFDC5Q8TCV5 224 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 RLN3Q8WXF3 142 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 NUCKS1Q9H1E3 243 aaKnown RBP21.98■■□□□ 1.11
LIME1-207ENST00000489212 PDCL3Q9H2J4 239 aa21.98■■□□□ 1.11
LIME1-207ENST00000489212 THAP10Q9P2Z0 257 aaPredicted RBP21.98■■□□□ 1.11
LIME1-207ENST00000489212 TBL1XO60907 577 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms