RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 MARCH2Q9P0N8 246 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 STIM2Q9P246 746 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 DPP7Q9UHL4 492 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 FEZ2Q9UHY8 353 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-206ENST00000489131 DNMT3LQ9UJW3 386 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 NEU3Q9UQ49 428 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 R3HDM2Q9Y2K5 976 aaKnown RBP13.3□□□□□ -0.28
TOP3A-206ENST00000489131 NEU2Q9Y3R4 380 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 ANAPC1Q9H1A4 1944 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 CLUHO75153 1309 aa13.3□□□□□ -0.28
TOP3A-206ENST00000489131 RAD51CO43502 376 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 CLASP2O75122 1294 aaKnown RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ZMYND10O75800 440 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 FGF19O95750 216 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 LRG1P02750 347 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ITGAVP06756 1048 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ATP5C1P36542 298 aaKnown RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ARL4AP40617 200 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 NR2C2P49116 596 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 DRG2P55039 364 aaKnown RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 SMAD3P84022 425 aaKnown RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 LMNB2Q03252 620 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 NOMO1Q15155 1222 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 HECTD3Q5T447 861 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ADAT2Q7Z6V5 191 aaKnown RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 TDHQ8IZJ6 230 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 LEMD2Q8NC56 503 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ZNF512Q96ME7 567 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ARHGEF4Q9NR80 690 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 ZDHHC7Q9NXF8 308 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 SFMBT1Q9UHJ3 866 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 AMACRQ9UHK6 382 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 RAD54BQ9Y620 910 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-206ENST00000489131 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
TOP3A-206ENST00000489131 APOL1O14791 398 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 DCLK1O15075 740 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 MSI1O43347 362 aaKnown RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 ZNF189O75820 626 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 H2AFXP16104 143 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 VCPP55072 806 aaKnown RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 TBX4P57082 545 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 DR1Q01658 176 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 XRCC4Q13426 336 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 KCNC3Q14003 757 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 PAFAH1B3Q15102 231 aaKnown RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 PPP6R3Q5H9R7 873 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 C10orf120Q5SQS8 335 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 KAZNQ674X7 775 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 NUGGCQ68CJ6 796 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 RFX8Q6ZV50 586 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 RFX6Q8HWS3 928 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 ZNF683Q8IZ20 524 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 PYROXD2Q8N2H3 581 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 ATL2Q8NHH9 583 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 PLD4Q96BZ4 506 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 BTN2A3PQ96KV6 586 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 OLFM3Q96PB7 478 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 PNKPQ96T60 521 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 EPAS1Q99814 870 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 MAK16Q9BXY0 300 aaKnown RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 NKX2-4Q9H2Z4 354 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 RETREG1Q9H6L5 497 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 DMGDHQ9UI17 866 aaKnown RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-206ENST00000489131 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
TOP3A-206ENST00000489131 LAMA2P24043 3122 aaKnown RBP13.27□□□□□ -0.28
TOP3A-206ENST00000489131 IGLV3-10A0A075B6K4 115 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 SYNJ2BP-COX16A0A087WUM0 186 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 WASH4PA8MWX3 477 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 FAM72CH0Y354 149 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 COCHO43405 550 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 PAGE1O75459 146 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 LATS1O95835 1130 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 APOEP02649 317 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 GOT1P17174 413 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 CDC25CP30307 473 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 MLLT6P55198 1093 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-206ENST00000489131 COG7P83436 770 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
TOP3A-206ENST00000489131 EFEMP1Q12805 493 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 BYSLQ13895 437 aaKnown RBP13.27□□□□□ -0.29
TOP3A-206ENST00000489131 TAF12Q16514 161 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 DUSP6Q16828 381 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 C5orf22Q49AR2 442 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.29
TOP3A-206ENST00000489131 PPP2R2DQ66LE6 453 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms