RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 BAP1Q92560 729 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 CNDP2Q96KP4 475 aaKnown RBP16.97■□□□□ 0.31
USP48-210ENST00000489108 HNRNPABQ99729 332 aaKnown RBP16.97■□□□□ 0.31
USP48-210ENST00000489108 SLC2A11Q9BYW1 496 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 DCLK3Q9C098 648 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 NRSN2Q9GZP1 204 aa16.97■□□□□ 0.31
USP48-210ENST00000489108 COL5A1P20908 1838 aaPredicted RBP16.96■□□□□ 0.31
USP48-210ENST00000489108 MGAQ8IWI9 3026 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 TEX51A0A1B0GUA7 166 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 RFPL3O75679 317 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 RALAP11233 206 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 KIF11P52732 1056 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 C21orf59P57076 290 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 RPS14P62263 151 aaKnown RBP16.96■□□□□ 0.31
USP48-210ENST00000489108 EFEMP1Q12805 493 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 RABEP1Q15276 862 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 FNDC3BQ53EP0 1204 aaKnown RBP16.96■□□□□ 0.31
USP48-210ENST00000489108 HES3Q5TGS1 186 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 FAM173BQ6P4H8 233 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 TADA2BQ86TJ2 420 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 CYB5D2Q8WUJ1 264 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 CYFIP2Q96F07 1278 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 TMEM245Q9H330 911 aa16.96■□□□□ 0.31
USP48-210ENST00000489108 PLXNA2O75051 1894 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
USP48-210ENST00000489108 LRRIQ3A6PVS8 624 aaPredicted RBP16.95■□□□□ 0.3
USP48-210ENST00000489108 VILLO15195 856 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 EXOC3O60645 756 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 C1SP09871 688 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 C7P10643 843 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 CDK4P11802 303 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 PSEN1P49768 467 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 BCAT1P54687 386 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 SNRPFP62306 86 aaKnown RBP16.95■□□□□ 0.3
USP48-210ENST00000489108 FAM26FQ5R3K3 315 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 UNC93AQ86WB7 457 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 CPXM2Q8N436 756 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 SNIP1Q8TAD8 396 aaKnown RBP16.95■□□□□ 0.3
USP48-210ENST00000489108 PARD3BQ8TEW8 1205 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 FGF11Q92914 225 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 ELF4Q99607 663 aaPredicted RBP16.95■□□□□ 0.3
USP48-210ENST00000489108 ACE2Q9BYF1 805 aaPredicted RBP16.95■□□□□ 0.3
USP48-210ENST00000489108 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 PRSS16Q9NQE7 514 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 PLA2G4CQ9UP65 541 aa16.95■□□□□ 0.3
USP48-210ENST00000489108 DNTTP04053 509 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 IGHV4-34P06331 123 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 ITGAVP06756 1048 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 P4HA1P13674 534 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 ACADVLP49748 655 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 AP3M2P53677 418 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 RACK1P63244 317 aaKnown RBP16.94■□□□□ 0.3
USP48-210ENST00000489108 CXADRP78310 365 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 ASIC1P78348 528 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 CCDC173Q0VFZ6 552 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 SHBQ15464 509 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 SGSM1Q2NKQ1 1148 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 SPOPLQ6IQ16 392 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 FBXL19Q6PCT2 694 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 EID2Q8N6I1 236 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 SAP25Q8TEE9 199 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 SLC6A18Q96N87 628 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 TWNKQ96RR1 684 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 LRRC27Q9C0I9 530 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 SGK2Q9HBY8 427 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 PNPLA8Q9NP80 782 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 KBTBD4Q9NVX7 518 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 CLIC5Q9NZA1 410 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
USP48-210ENST00000489108 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 NAV2Q8IVL1 2488 aa16.94■□□□□ 0.3
USP48-210ENST00000489108 FAM47DPA6NHR8 397 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 BRINP1O60477 761 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 KIF20AO95235 890 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 WNT1P04628 370 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 ABCB4P21439 1286 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 HLA-FP30511 346 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 CLDN10P78369 228 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 TLE3Q04726 772 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 ZBTB16Q05516 673 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 KIAA0895LQ68EN5 471 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 TSC1Q92574 1164 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 TMEM176AQ96HP8 235 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 CDK5RAP1Q96SZ6 601 aaKnown RBP16.93■□□□□ 0.3
USP48-210ENST00000489108 EBF2Q9HAK2 575 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 ATMQ13315 3056 aa16.93■□□□□ 0.3
USP48-210ENST00000489108 A0A1W2PPC4 97 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 CAPN8A6NHC0 703 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 STX6O43752 255 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 HOXD9P28356 352 aaPredicted RBP16.92■□□□□ 0.3
USP48-210ENST00000489108 ASPAP45381 313 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 DLG4P78352 724 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 MPPE1Q53F39 396 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 CHST9Q7L1S5 443 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 SPACA3Q8IXA5 215 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 FAM217AQ8IXS0 508 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms