RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 MEA1Q16626 185 aa23.97■■□□□ 1.43
COL9A3-213ENST00000489045 TPD52L1Q16890 204 aaPredicted RBP23.97■■□□□ 1.43
COL9A3-213ENST00000489045 ADGRF1Q5T601 910 aa23.97■■□□□ 1.43
COL9A3-213ENST00000489045 GBP6Q6ZN66 633 aa23.97■■□□□ 1.43
COL9A3-213ENST00000489045 SCUBE3Q8IX30 993 aa23.97■■□□□ 1.43
COL9A3-213ENST00000489045 ZNF606Q8WXB4 792 aa23.97■■□□□ 1.43
COL9A3-213ENST00000489045 ACP6Q9NPH0 428 aa23.97■■□□□ 1.43
COL9A3-213ENST00000489045 IGHV1OR15-9A0A0B4J2B8 117 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 LNP1A1A4G5 178 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 KHNYNO15037 678 aaKnown RBP23.96■■□□□ 1.43
COL9A3-213ENST00000489045 NPC1O15118 1278 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 NCAM1P13591 858 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 ACADSBP45954 432 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 RPL6Q02878 288 aaKnown RBP23.96■■□□□ 1.43
COL9A3-213ENST00000489045 EIF4HQ15056 248 aaKnown RBP23.96■■□□□ 1.43
COL9A3-213ENST00000489045 ARHGAP44Q17R89 818 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 EXOC3L4Q17RC7 722 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 SPDYCQ5MJ68 293 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 LYSMD4Q5XG99 296 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 DDX1Q92499 740 aaKnown RBP23.96■■□□□ 1.43
COL9A3-213ENST00000489045 MRGPRX1Q96LB2 322 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 FAM81BQ96LP2 452 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 CIPCQ9C0C6 399 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 ELOVL2Q9NXB9 296 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 APEX2Q9UBZ4 518 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 CYP8B1Q9UNU6 501 aa23.96■■□□□ 1.43
COL9A3-213ENST00000489045 ATXN2Q99700 1313 aaKnown RBP23.95■■□□□ 1.42
COL9A3-213ENST00000489045 BECN2A8MW95 431 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 TM4SF5O14894 197 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 AP5Z1O43299 807 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 ZNF217O75362 1048 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 FYNP06241 537 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 KCNA4P22459 653 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 USP8P40818 1118 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 SGSHP51688 502 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 TBX4P57082 545 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 RING1Q06587 406 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 ENPP2Q13822 863 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 ZNF234Q14588 700 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 STARD3Q14849 445 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 DPCR1Q3MIW9 517 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 NUGGCQ68CJ6 796 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 TMEM215Q68D42 235 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 SLC36A4Q6YBV0 504 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 UNC45BQ8IWX7 931 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 DQX1Q8TE96 717 aaKnown RBP23.95■■□□□ 1.42
COL9A3-213ENST00000489045 SORCS1Q8WY21 1168 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 FAM149B1Q96BN6 582 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 TMA16Q96EY4 203 aaKnown RBP23.95■■□□□ 1.42
COL9A3-213ENST00000489045 SLC4A5Q9BY07 1137 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 CD93Q9NPY3 652 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 CYTH4Q9UIA0 394 aa23.95■■□□□ 1.42
COL9A3-213ENST00000489045 GOLGA6L7A0A1B0GV03 622 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 GTPBP10A4D1E9 387 aaKnown RBP23.94■■□□□ 1.42
COL9A3-213ENST00000489045 SART1O43290 800 aaKnown RBP23.94■■□□□ 1.42
COL9A3-213ENST00000489045 PON1P27169 355 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 HLA-FP30511 346 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 FUT11Q495W5 492 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 RFWD3Q6PCD5 774 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 KIAA1324Q6UXG2 1013 aaKnown RBP23.94■■□□□ 1.42
COL9A3-213ENST00000489045 DEFB119Q8N690 84 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 STK32AQ8WU08 396 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 SERPINB11Q96P15 392 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 NUP62CLQ9H1M0 184 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 THAP9Q9H5L6 903 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 TMEM74BQ9NUR3 256 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 NAALADL1Q9UQQ1 740 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 ADAMTS9Q9P2N4 1935 aa23.94■■□□□ 1.42
COL9A3-213ENST00000489045 E5RJQ4 531 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 ACSL4O60488 711 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 ITPKAP23677 461 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 SLC11A2P49281 568 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 E2F5Q15329 346 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 FAM133BQ5BKY9 247 aaKnown RBP23.93■■□□□ 1.42
COL9A3-213ENST00000489045 SYT12Q8IV01 421 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 SHC3Q92529 594 aa23.93■■□□□ 1.42
COL9A3-213ENST00000489045 EVLQ9UI08 416 aaPredicted RBP23.93■■□□□ 1.42
COL9A3-213ENST00000489045 C4orf47A7E2U8 309 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 PAPSS1O43252 624 aaPredicted RBP23.92■■□□□ 1.42
COL9A3-213ENST00000489045 ADRB1P08588 477 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 PRKCHP24723 683 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 SLC6A4P31645 630 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 ANP32AP39687 249 aaKnown RBP23.92■■□□□ 1.42
COL9A3-213ENST00000489045 IRX4P78413 519 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 ARID5AQ03989 594 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 MAN2A1Q16706 1144 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 TRIM61Q5EBN2 209 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 PIK3R6Q5UE93 754 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 NADSYN1Q6IA69 706 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 FAM114A1Q8IWE2 563 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 ADAM32Q8TC27 787 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 WFIKKN2Q8TEU8 576 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 FCRL2Q96LA5 508 aaPredicted RBP23.92■■□□□ 1.42
COL9A3-213ENST00000489045 SIX2Q9NPC8 291 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 ABCB8Q9NUT2 735 aa23.92■■□□□ 1.42
COL9A3-213ENST00000489045 AJAP1Q9UKB5 411 aaPredicted RBP23.92■■□□□ 1.42
COL9A3-213ENST00000489045 CAPN9O14815 690 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TIMM44O43615 452 aa23.91■■□□□ 1.42
COL9A3-213ENST00000489045 SYNCRIPO60506 623 aaKnown RBP23.91■■□□□ 1.42
COL9A3-213ENST00000489045 TBL1XO60907 577 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms