RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TSPAN3O60637 253 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 TRUB2O95900 331 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 HOXD9P28356 352 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC6A4P31645 630 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 CNR2P34972 360 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 SGSHP51688 502 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC6A3Q01959 620 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 DCAF6Q58WW2 860 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 OR6B2Q6IFH4 312 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC26A9Q7LBE3 791 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 NEK11Q8NG66 645 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 MYEOVQ96EZ4 313 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 EP300Q09472 2414 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 HSF2BPO75031 334 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 GRAP2O75791 330 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 APBB3O95704 486 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 LSM8O95777 96 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 CYBBP04839 570 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 STAT1P42224 750 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 SLC11A2P49281 568 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 SNX16P57768 344 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ZNF445P59923 1031 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 NOMO3P69849 1222 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 FMO1Q01740 532 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 CDR2Q01850 454 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 GEN1Q17RS7 908 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ZC3H12AQ5D1E8 599 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 RFWD3Q6PCD5 774 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 NUDT18Q6ZVK8 323 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 RASSF3Q86WH2 238 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ZDHHC17Q8IUH5 632 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 DDI1Q8WTU0 396 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 C18orf8Q96DM3 657 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ACOX2Q99424 681 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 CBX8Q9HC52 389 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 CD248Q9HCU0 757 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 FANCMQ8IYD8 2048 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 ATG2BQ96BY7 2078 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 OTOGLQ3ZCN5 2332 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 FAM186AA6NE01 2351 aa16.58■□□□□ 0.24
CTDSP1-209ENST00000488627 KCNU1A8MYU2 1149 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 AXIN1O15169 862 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 PTMSP20962 102 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 SCNN1AP37088 669 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 DGKEP52429 567 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 CDK17Q00537 523 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 EOGTQ5NDL2 527 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 MPP7Q5T2T1 576 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 NAA35Q5VZE5 725 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 TMEM215Q68D42 235 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 XYLT1Q86Y38 959 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 TSTD1Q8NFU3 115 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 IPO4Q8TEX9 1081 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 CPA5Q8WXQ8 436 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 SPAG5Q96R06 1193 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 PCDHB18PQ96TA0 734 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 ADAM33Q9BZ11 813 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 CALCOCO1Q9P1Z2 691 aa16.57■□□□□ 0.24
CTDSP1-209ENST00000488627 A0A1B0GTH6 734 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 A0A1W2PQF6 199 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 FAM170AA1A519 330 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 HLA-FP30511 346 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 SIM2Q14190 667 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 C2CD6Q53TS8 623 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 OTUD1Q5VV17 481 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 KIAA0907Q7Z7F0 614 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 DCLK2Q8N568 766 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 GAB3Q8WWW8 586 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 RUBCNQ92622 972 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 NT5C3BQ969T7 300 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 LMLNQ96KR4 655 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 SYNCQ9H7C4 482 aa16.56■□□□□ 0.24
CTDSP1-209ENST00000488627 GVINP1Q7Z2Y8 2422 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 DAB1O75553 588 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 NTSR1P30989 418 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 NOS2P35228 1153 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 MATKP42679 507 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 NR1I3Q14994 352 aa16.55■□□□□ 0.24
CTDSP1-209ENST00000488627 LPAL2Q16609 132 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms