RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 FAM71AQ8IYT1 594 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 PGBD3Q8N328 593 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 RLN3Q8WXF3 142 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 SPACA7Q96KW9 195 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 FCRL2Q96LA5 508 aaPredicted RBP18.47■□□□□ 0.55
ITGB1-215ENST00000488494 GABRG3Q99928 467 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 CDV3Q9UKY7 258 aaKnown RBP18.47■□□□□ 0.55
ITGB1-215ENST00000488494 PCDHGC3Q9UN70 934 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 TLR6Q9Y2C9 796 aa18.47■□□□□ 0.55
ITGB1-215ENST00000488494 CAPN9O14815 690 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 RHOBTB1O94844 696 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 CLCN1P35523 988 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 MPLP40238 635 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 P2RY2P41231 377 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 KCNMA1Q12791 1236 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 NNTQ13423 1086 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 DRAP1Q14919 205 aaPredicted RBP18.46■□□□□ 0.55
ITGB1-215ENST00000488494 KRT31Q15323 416 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 STX1AQ16623 288 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 FAM133BQ5BKY9 247 aaKnown RBP18.46■□□□□ 0.55
ITGB1-215ENST00000488494 CCDC183Q5T5S1 534 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 KLHDC7AQ5VTJ3 777 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 SYPL2Q5VXT5 272 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 RFWD3Q6PCD5 774 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 BEND5Q7L4P6 421 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 WDTC1Q8N5D0 677 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 PPP1R13BQ96KQ4 1090 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 PRICKLE1Q96MT3 831 aaPredicted RBP18.46■□□□□ 0.55
ITGB1-215ENST00000488494 SLC2A11Q9BYW1 496 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 CIPCQ9C0C6 399 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 SMOC1Q9H4F8 434 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 POPDC2Q9HBU9 364 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 PLCB1Q9NQ66 1216 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 CALCOCO1Q9P1Z2 691 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 PCDHGA5Q9Y5G8 931 aa18.46■□□□□ 0.55
ITGB1-215ENST00000488494 DNAH14Q0VDD8 3507 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 GOLGA6L7A0A1B0GV03 622 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 PRR5-ARHGAP8B1AHC4 643 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 ACSL4O60488 711 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 MOCS2O96007 188 aaPredicted RBP18.45■□□□□ 0.54
ITGB1-215ENST00000488494 UCHL3P15374 230 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 NDUFV2P19404 249 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 SLC6A4P31645 630 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 KRT9P35527 623 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 YWHAZP63104 245 aaKnown RBP18.45■□□□□ 0.54
ITGB1-215ENST00000488494 ARHGAP8P85298 464 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 EIF4HQ15056 248 aaKnown RBP18.45■□□□□ 0.54
ITGB1-215ENST00000488494 SF3A2Q15428 464 aaKnown RBP18.45■□□□□ 0.54
ITGB1-215ENST00000488494 TAF5Q15542 800 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 SMYD5Q6GMV2 418 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 NADSYN1Q6IA69 706 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 FRMD1Q8N878 549 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 IPO4Q8TEX9 1081 aaKnown RBP18.45■□□□□ 0.54
ITGB1-215ENST00000488494 SORCS1Q8WY21 1168 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 NOX5Q96PH1 765 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 VPS16Q9H269 839 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 LHX5Q9H2C1 402 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 ANO10Q9NW15 660 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 DLL3Q9NYJ7 618 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 CEP83Q9Y592 693 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 STON1Q9Y6Q2 735 aa18.45■□□□□ 0.54
ITGB1-215ENST00000488494 MUC22E2RYF6 1773 aaPredicted RBP18.45■□□□□ 0.54
ITGB1-215ENST00000488494 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-215ENST00000488494 WASH3PC4AMC7 463 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 F8VZ95 297 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 IRAK2O43187 625 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 ERBB2P04626 1255 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 TPM2P07951 284 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 PITX1P78337 314 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-215ENST00000488494 MYL5Q02045 173 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 CREB5Q02930 508 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 PUM1Q14671 1186 aaKnown RBP eCLIP18.44■□□□□ 0.543e-11■□□□□ 8.1
ITGB1-215ENST00000488494 MAP7D1Q3KQU3 841 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 PIK3R6Q5UE93 754 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 FAM183BPQ6ZVS7 135 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 UCMAQ8WVF2 138 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 TMA16Q96EY4 203 aaKnown RBP18.44■□□□□ 0.54
ITGB1-215ENST00000488494 SLC39A13Q96H72 371 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 NAA15Q9BXJ9 866 aaKnown RBP18.44■□□□□ 0.54
ITGB1-215ENST00000488494 NUCKS1Q9H1E3 243 aaKnown RBP18.44■□□□□ 0.54
ITGB1-215ENST00000488494 SLC6A17Q9H1V8 727 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 SYNCQ9H7C4 482 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 FAM204AQ9H8W3 233 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 ABCB8Q9NUT2 735 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 FANCLQ9NW38 375 aa18.44■□□□□ 0.54
ITGB1-215ENST00000488494 MBD1Q9UIS9 605 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-215ENST00000488494 PLXND1Q9Y4D7 1925 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 FAM170AA1A519 330 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 ZBTB24O43167 697 aaPredicted RBP18.43■□□□□ 0.54
ITGB1-215ENST00000488494 TBL1XO60907 577 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 HSF2BPO75031 334 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 IGLV3-25P01717 112 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 APOEP02649 317 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 CYP11B1P15538 503 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 HLA-FP30511 346 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 IL12RB1P42701 662 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 BPIFB4P59827 614 aa18.43■□□□□ 0.54
ITGB1-215ENST00000488494 ZNF234Q14588 700 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms