RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 NAT10Q9H0A0 1025 aaKnown RBP14.79□□□□□ -0.04
COL9A2-208ENST00000488463 NLRC4Q9NPP4 1024 aa14.79□□□□□ -0.04
COL9A2-208ENST00000488463 SLC8A2Q9UPR5 921 aa14.79□□□□□ -0.04
COL9A2-208ENST00000488463 TLR6Q9Y2C9 796 aa14.79□□□□□ -0.04
COL9A2-208ENST00000488463 DAAM1Q9Y4D1 1078 aa14.79□□□□□ -0.04
COL9A2-208ENST00000488463 MUC22E2RYF6 1773 aaPredicted RBP14.78□□□□□ -0.04
COL9A2-208ENST00000488463 GOLGA6L7A0A1B0GV03 622 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 SYCE3A1L190 88 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 IRAK2O43187 625 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 ACSL4O60488 711 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 GFPT2O94808 682 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 MMEP08473 750 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 CDK11BP21127 795 aaKnown RBP14.78□□□□□ -0.04
COL9A2-208ENST00000488463 CNR2P34972 360 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 SOX5P35711 763 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 DGKGP49619 791 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 NOMO3P69849 1222 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 UBXN1Q04323 297 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 GEN1Q17RS7 908 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 C10orf76Q5T2E6 689 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 OTUD1Q5VV17 481 aaPredicted RBP14.78□□□□□ -0.04
COL9A2-208ENST00000488463 TAF3Q5VWG9 929 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 EGFLAMQ63HQ2 1017 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 NUGGCQ68CJ6 796 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 TMEM215Q68D42 235 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 UNC45BQ8IWX7 931 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 DEFB106AQ8N104 65 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 TMEM35BQ8NCS4 154 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 ZNF397Q8NF99 534 aaPredicted RBP14.78□□□□□ -0.04
COL9A2-208ENST00000488463 GOLGA1Q92805 767 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 SERPINB11Q96P15 392 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 ACOX2Q99424 681 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
COL9A2-208ENST00000488463 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
COL9A2-208ENST00000488463 GON4LQ3T8J9 2241 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 PLXND1Q9Y4D7 1925 aa14.78□□□□□ -0.04
COL9A2-208ENST00000488463 CKAP5Q14008 2032 aa14.77□□□□□ -0.04
COL9A2-208ENST00000488463 TSPAN3O60637 253 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 APBB3O95704 486 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 LSM8O95777 96 aaKnown RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 TRUB2O95900 331 aaKnown RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 TPM2P07951 284 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 FMO1Q01740 532 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 SLC6A3Q01959 620 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 PREPLQ4J6C6 727 aaPredicted RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 MPPE1Q53F39 396 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 EFHC1Q5JVL4 640 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 PIK3R6Q5UE93 754 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 RFWD3Q6PCD5 774 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 KIAA0907Q7Z7F0 614 aaPredicted RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 ZNF677Q86XU0 584 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 XYLT1Q86Y38 959 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 ZNF513Q8N8E2 541 aaPredicted RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 ANKRD20A12PQ8NF67 263 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 OLIG1Q8TAK6 271 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 NT5C3BQ969T7 300 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 LMLNQ96KR4 655 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 PRICKLE1Q96MT3 831 aaPredicted RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 NOX5Q96PH1 765 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 TRIM62Q9BVG3 475 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 SLC2A11Q9BYW1 496 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 IRX2Q9BZI1 471 aaPredicted RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 CALCOCO1Q9P1Z2 691 aa14.77□□□□□ -0.05
COL9A2-208ENST00000488463 XPO7Q9UIA9 1087 aaKnown RBP14.77□□□□□ -0.05
COL9A2-208ENST00000488463 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 A0A1W2PQF6 199 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 SMTNL1A8MU46 457 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 KCNU1A8MYU2 1149 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 AXIN1O15169 862 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 HSF2BPO75031 334 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 DAB1O75553 588 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 GRAP2O75791 330 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 CYP1A1P04798 512 aaPredicted RBP14.76□□□□□ -0.05
COL9A2-208ENST00000488463 TGM1P22735 817 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 HLA-FP30511 346 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 DGKEP52429 567 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 ZNF445P59923 1031 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 CDR2Q01850 454 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 ENPP2Q13822 863 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 C2CD6Q53TS8 623 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 DCAF6Q58WW2 860 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
COL9A2-208ENST00000488463 OR6B2Q6IFH4 312 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 DCLK2Q8N568 766 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL9A2-208ENST00000488463 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 WFDC5Q8TCV5 224 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 DDI1Q8WTU0 396 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 GAB3Q8WWW8 586 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 PCDHB18PQ96TA0 734 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 GABRG3Q99928 467 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
COL9A2-208ENST00000488463 CAPN9O14815 690 aa14.75□□□□□ -0.05
COL9A2-208ENST00000488463 CYBBP04839 570 aa14.75□□□□□ -0.05
COL9A2-208ENST00000488463 TFE3P19532 575 aaPredicted RBP14.75□□□□□ -0.05
COL9A2-208ENST00000488463 SCNN1AP37088 669 aa14.75□□□□□ -0.05
COL9A2-208ENST00000488463 STAT1P42224 750 aa14.75□□□□□ -0.05
COL9A2-208ENST00000488463 PTP4A2Q12974 167 aa14.75□□□□□ -0.05
COL9A2-208ENST00000488463 EOGTQ5NDL2 527 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms