RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 AWAT1Q58HT5 328 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 ZNF788Q6ZQV5 615 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 RAB11FIP2Q7L804 512 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC44A2Q8IWA5 706 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 PPM1EQ8WY54 764 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 AKAP1Q92667 903 aaKnown RBP eCLIP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 RSC1A1Q92681 617 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 C3orf49Q96BT1 292 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 HIC2Q96JB3 615 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 RITA1Q96K30 269 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 CRAMP1Q96RY5 1269 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 PAAF1Q9BRP4 392 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 PABPC3Q9H361 631 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 ELAC1Q9H777 363 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 MLXIPQ9HAP2 919 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 RXFP3Q9NSD7 469 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 ARL8BQ9NVJ2 186 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 ARHGEF17Q96PE2 2063 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 AOX1Q06278 1338 aa4.4□□□□□ -1.71
ECHDC1-217ENST00000488087 GXYLT2A0PJZ3 443 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 EFCAB8A8MWE9 144 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 H3BNC9 293 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 M0QZQ0 153 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 RNF8O76064 485 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 LARGE1O95461 756 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 MBPP02686 304 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC8A1P32418 973 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 PROK1P58294 105 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 TUBA4AP68366 448 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 POSTNQ15063 836 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 PFKFB3Q16875 520 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 AAK1Q2M2I8 961 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 NFRKBQ6P4R8 1299 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 C16orf89Q6UX73 402 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 RANBP10Q6VN20 620 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 PTF1AQ7RTS3 328 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 GALNT15Q8N3T1 639 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 NKAPQ8N5F7 415 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 STT3BQ8TCJ2 826 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 OTUD7AQ8TE49 926 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 GLMPQ8WWB7 406 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 CPT1BQ92523 772 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 NPIPB3Q92617 1050 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 SCLT1Q96NL6 688 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 FAM167BQ9BTA0 163 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 PRDM8Q9NQV8 689 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 RAB21Q9UL25 225 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 MAFFQ9ULX9 164 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 C19orf53Q9UNZ5 99 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 CNTN6Q9UQ52 1028 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 HEMK1Q9Y5R4 338 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3DA0A087WVF3 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3IA0A087WXS9 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3EA0A087X179 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3KA0A087X1G2 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3BA6NDS4 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3FA6NER0 549 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TISP43B9A030 160 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3LB9A6J9 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 M0QYT0 321 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 IPO5O00410 1097 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 NKX2-8O15522 239 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 PIP5K1CO60331 668 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 PRKCGP05129 697 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3HP0C7X1 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 CYP2D6P10635 497 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 CYP2A6P11509 494 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 PEPDP12955 493 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 VEGFAP15692 232 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 CCT5P48643 541 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 PPM1FP49593 454 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 VPS41P49754 854 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TFF2Q03403 129 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC10A2Q12908 348 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 SLC14A1Q13336 389 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 KPNB1Q14974 876 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3GQ6DHY5 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TANGO2Q6ICL3 276 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3CQ6IPX1 549 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 JMJD6Q6NYC1 403 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 WDR93Q6P2C0 686 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 RFX8Q6ZV50 586 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 RRAGAQ7L523 313 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 SMAP1Q8IYB5 467 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TBC1D3Q8IZP1 549 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 MYRIPQ8NFW9 859 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 SEMA6DQ8NFY4 1073 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 KAZALD1Q96I82 304 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TRAPPC9Q96Q05 1148 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 ISCA1Q9BUE6 129 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 MECRQ9BV79 373 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 ELOVL1Q9BW60 279 aa4.38□□□□□ -1.71
ECHDC1-217ENST00000488087 TMEM120AQ9BXJ8 343 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms