RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 SLC35B2Q8TB61 432 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 SMCR8Q8TEV9 937 aaPredicted RBP3.9□□□□□ -1.78
HFM1-208ENST00000488023 HMGB4Q8WW32 186 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 PERPQ96FX8 193 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 VKORC1Q9BQB6 163 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 MRI1Q9BV20 369 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 HERC2P3Q9BVR0 1158 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 TTYH3Q9C0H2 523 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 IL23AQ9NPF7 189 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 SLC2A4RGQ9NR83 387 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 RLIMQ9NVW2 624 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 ARGLU1Q9NWB6 273 aaPredicted RBP3.9□□□□□ -1.78
HFM1-208ENST00000488023 PARPBPQ9NWS1 579 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 MOCS1Q9NZB8 636 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 NDUFAF4Q9P032 175 aa3.9□□□□□ -1.78
HFM1-208ENST00000488023 DNMT3BQ9UBC3 853 aaKnown RBP3.9□□□□□ -1.78
HFM1-208ENST00000488023 CORO1CQ9ULV4 474 aaPredicted RBP3.9□□□□□ -1.78
HFM1-208ENST00000488023 REXO2Q9Y3B8 237 aaKnown RBP3.9□□□□□ -1.78
HFM1-208ENST00000488023 NPIPB15A6NHN6 443 aaPredicted RBP3.9□□□□□ -1.79
HFM1-208ENST00000488023 PEX12O00623 359 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 SLC7A4O43246 635 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 TEX33O43247 280 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 CCP110O43303 1012 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 TSPAN9O75954 239 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 GYPEP15421 78 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 ATP5JP18859 108 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 FGFR4P22455 802 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 FDXRP22570 491 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 NTSR1P30989 418 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 SLC5A2P31639 672 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 PIK3CAP42336 1068 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 SF3A3Q12874 501 aaKnown RBP eCLIP3.9□□□□□ -1.79
HFM1-208ENST00000488023 CRHR2Q13324 411 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 AMOTQ4VCS5 1084 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 OTUD7BQ6GQQ9 843 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 DGAT2L7PQ6IED9 249 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 IL27RAQ6UWB1 636 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 PRPF39Q86UA1 669 aaKnown RBP3.9□□□□□ -1.79
HFM1-208ENST00000488023 RAB11FIP4Q86YS3 637 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 GSPT2Q8IYD1 628 aaKnown RBP3.9□□□□□ -1.79
HFM1-208ENST00000488023 CMTM4Q8IZR5 234 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 WDTC1Q8N5D0 677 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 MSANTD4Q8NCY6 345 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 SLC17A8Q8NDX2 589 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 NCSTNQ92542 709 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 KTI12Q96EK9 354 aaPredicted RBP3.9□□□□□ -1.79
HFM1-208ENST00000488023 FEM1CQ96JP0 617 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 MESP1Q9BRJ9 268 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 PDE7BQ9NP56 450 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 TAS2R10Q9NYW0 307 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 CLCA2Q9UQC9 943 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 RCE1Q9Y256 329 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 CDY1Q9Y6F8 540 aa3.9□□□□□ -1.79
HFM1-208ENST00000488023 AQP7P3A6NL99 342 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 EFCAB8A8MWE9 144 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 CXorf49A8MYA2 514 aaPredicted RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 SH2B2O14492 632 aaPredicted RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 DCLK1O15075 740 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 CCNT2O60583 730 aaKnown RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 AGFG2O95081 481 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 HNRNPCP07910 306 aaKnown RBP eCLIP3.89□□□□□ -1.79
HFM1-208ENST00000488023 ATP6V1B1P15313 513 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 GCH1P30793 250 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 ICAM3P32942 547 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 ABCD1P33897 745 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 EIF2DP41214 584 aaKnown RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 MMP14P50281 582 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 COL10A1Q03692 680 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 FHL3Q13643 280 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 DCTN1Q14203 1278 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 RRP1BQ14684 758 aaKnown RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 MED22Q15528 200 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 INSCQ1MX18 579 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 PTCHD3Q3KNS1 767 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 FAM47AQ5JRC9 791 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 FAM160B1Q5W0V3 765 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 GPR139Q6DWJ6 353 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 PPP1R32Q7Z5V6 425 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 GAS2L3Q86XJ1 694 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 RHOT2Q8IXI1 618 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 CEP57L1Q8IYX8 460 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 SCML4Q8N228 414 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 FAM71DQ8N9W8 422 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 APPL2Q8NEU8 664 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 NFKBIDQ8NI38 313 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 WDR60Q8WVS4 1066 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 TBC1D31Q96DN5 1066 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 ZNF764Q96H86 408 aaPredicted RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 FAM227BQ96M60 508 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 TTPALQ9BTX7 342 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 SLC46A2Q9BY10 475 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 IMPG2Q9BZV3 1241 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 MUC13Q9H3R2 512 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 GSTO2Q9H4Y5 243 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 STN1Q9H668 368 aaKnown RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 UNKLQ9H9P5 680 aaKnown RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 ERVK-5Q9HDB9 667 aa3.89□□□□□ -1.79
HFM1-208ENST00000488023 TLR8Q9NR97 1041 aaKnown RBP3.89□□□□□ -1.79
HFM1-208ENST00000488023 ZSCAN32Q9NX65 697 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms