RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 NPTX2P47972 431 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 CDK7P50613 346 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 ZNF135P52742 658 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-217ENST00000487825 ACLYP53396 1101 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 BACE1P56817 501 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 POU6F2P78424 691 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-217ENST00000487825 COLEC12Q5KU26 742 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 TSTD2Q5T7W7 516 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 TMPRSS9Q7Z410 1059 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 SUGP1Q8IWZ8 645 aaKnown RBP5.53□□□□□ -1.52
BRCA1-217ENST00000487825 PI4KAP1Q8N8J0 262 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 B3GALNT2Q8NCR0 500 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 NEK9Q8TD19 979 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 PGBD1Q96JS3 809 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 FSD1Q9BTV5 496 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 SMOC2Q9H3U7 446 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 CNNM1Q9NRU3 951 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 GNL3LQ9NVN8 582 aaKnown RBP5.53□□□□□ -1.52
BRCA1-217ENST00000487825 TMOD4Q9NZQ9 345 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 MUTYHQ9UIF7 546 aa5.53□□□□□ -1.52
BRCA1-217ENST00000487825 TRIP12Q14669 1992 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-217ENST00000487825 KIF16BQ96L93 1317 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 FANCMQ8IYD8 2048 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 EP300Q09472 2414 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 TMEM221A6NGB7 291 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 PRSS29PA6NIE9 313 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 C19orf81C9J6K1 198 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 F5H697 171 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 M0R296 226 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ORC4O43929 436 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 VPS4BO75351 444 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ELFN1P0C7U0 828 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 CHRM3P20309 590 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 LMO1P25800 156 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ADORA2AP29274 412 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 CYP2C18P33260 490 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 NBL1P41271 181 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 TMPOP42166 694 aaKnown RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 GRIA3P42263 894 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 RECQLP46063 649 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 HLXQ14774 488 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 CAVIN4Q5BKX8 364 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 PRAMEF19Q5SWL8 479 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 DGLUCYQ7Z3D6 616 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 GRASPQ7Z6J2 395 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 PDSS2Q86YH6 399 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ADHFE1Q8IWW8 467 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 SH2D3CQ8N5H7 860 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 POC1BQ8TC44 478 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 TNPO1Q92973 898 aaKnown RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 RMDN1Q96DB5 314 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 DDX4Q9NQI0 724 aaKnown RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 SIDT1Q9NXL6 827 aaKnown RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 CFAP97Q9P2B7 532 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ABCF2Q9UG63 623 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 NRBP1Q9UHY1 535 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ST3GAL5Q9UNP4 418 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 POLHQ9Y253 713 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 LAS1LQ9Y4W2 734 aaKnown RBP5.52□□□□□ -1.53
BRCA1-217ENST00000487825 MYH1P12882 1939 aa5.52□□□□□ -1.53
BRCA1-217ENST00000487825 ELP1O95163 1332 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 UMODL1Q5DID0 1318 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 SYNRGQ9UMZ2 1314 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 SPTBN2O15020 2390 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 MYH8P13535 1937 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 A0A0B4J269 797 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 CCDC151A5D8V7 595 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 VWC2LB2RUY7 222 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 CD4P01730 458 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 PRDX5P30044 214 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 PIK3CGP48736 1102 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 VCPP55072 806 aaKnown RBP5.51□□□□□ -1.53
BRCA1-217ENST00000487825 TUBB3Q13509 450 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 HABP2Q14520 560 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-217ENST00000487825 PTPRRQ15256 657 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 ST3GAL2Q16842 350 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 CCDC57Q2TAC2 916 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 ZKSCAN2Q63HK3 967 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 CCSAPQ6IQ19 270 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-217ENST00000487825 DPP9Q86TI2 863 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 KLHDC9Q8NEP7 349 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 GDPD5Q8WTR4 605 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 UROC1Q96N76 676 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 TPSD1Q9BZJ3 242 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 MYH16Q9H6N6 1097 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 HOMER2Q9NSB8 354 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 FAM50BQ9Y247 325 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 SPEF1Q9Y4P9 236 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 MICAL3Q7RTP6 2002 aa5.51□□□□□ -1.53
BRCA1-217ENST00000487825 MROH5Q6ZUA9 1318 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 NAV1Q8NEY1 1877 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 MYO7AQ13402 2215 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 LINC00473A8K010 186 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 E7ENX8 843 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 STRNO43815 780 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 KIF20AO95235 890 aa5.5□□□□□ -1.53
BRCA1-217ENST00000487825 IL33O95760 270 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms