RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FUT11Q495W5 492 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 RGL4Q8IZJ4 473 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 GTPBP2Q9BX10 602 aaKnown RBP12.98□□□□□ -0.33
SREBF1-215ENST00000487401 MIS12Q9H081 205 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 UBE2TQ9NPD8 197 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-215ENST00000487401 CLEC4EQ9ULY5 219 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 PLA2G4CQ9UP65 541 aa12.98□□□□□ -0.33
SREBF1-215ENST00000487401 GIPC1O14908 333 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 CALCAP01258 141 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 LTFP02788 710 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 SERPINF2P08697 491 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 ACADMP11310 421 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
SREBF1-215ENST00000487401 PMLP29590 882 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 CD6P30203 668 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 OXTRP30559 389 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 TBX4P57082 545 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 ZNF234Q14588 700 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 WDR45BQ5MNZ6 344 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 PEAR1Q5VY43 1037 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-215ENST00000487401 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 MSANTD2Q6P1R3 559 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 SERPINA13PQ6UXR4 307 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
SREBF1-215ENST00000487401 TMPRSS6Q8IU80 811 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 HDDC3Q8N4P3 179 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 WFIKKN2Q8TEU8 576 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 SORCS1Q8WY21 1168 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 PRCCQ92733 491 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-215ENST00000487401 SIPA1Q96FS4 1042 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-215ENST00000487401 HSPA12BQ96MM6 686 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
SREBF1-215ENST00000487401 ZSWIM1Q9BR11 485 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 SLC32A1Q9H598 525 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 PTPRDP23468 1912 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
SREBF1-215ENST00000487401 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
SREBF1-215ENST00000487401 MED7O43513 233 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 GABBR2O75899 941 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 EPHX1P07099 455 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 SYPP08247 313 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 NCAM1P13591 858 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 CEACAM1P13688 526 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 GNSP15586 552 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 HOXD9P28356 352 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ACADSBP45954 432 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 MARSP56192 900 aaKnown RBP12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ENPP2Q13822 863 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 FNDC3BQ53EP0 1204 aaKnown RBP12.96□□□□□ -0.33
SREBF1-215ENST00000487401 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ENOSF1Q7L5Y1 443 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 SLC41A1Q8IVJ1 513 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 DEFB124Q8NES8 71 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 TOE1Q96GM8 510 aaKnown RBP12.96□□□□□ -0.33
SREBF1-215ENST00000487401 KREMEN1Q96MU8 473 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 MKRN2Q9H000 416 aaKnown RBP12.96□□□□□ -0.33
SREBF1-215ENST00000487401 FSCN3Q9NQT6 498 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ABCB8Q9NUT2 735 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 SUSD2Q9UGT4 822 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 RWDD2AQ9UIY3 292 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 GGA2Q9UJY4 613 aa12.96□□□□□ -0.33
SREBF1-215ENST00000487401 ZNF638Q14966 1978 aaKnown RBP12.95□□□□□ -0.34
SREBF1-215ENST00000487401 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 MEI4A8MW99 385 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 IRAK2O43187 625 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 ACSL4O60488 711 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 OPHN1O60890 802 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 TBL1XO60907 577 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-215ENST00000487401 ATP5BP06576 529 aaKnown RBP12.95□□□□□ -0.34
SREBF1-215ENST00000487401 PABPC1P11940 636 aaKnown RBP12.95□□□□□ -0.34
SREBF1-215ENST00000487401 PRKCHP24723 683 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 HLA-FP30511 346 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 UBE2HP62256 183 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 SHC2P98077 582 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 RING1Q06587 406 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 CAMK4Q16566 473 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 PLEKHG6Q3KR16 790 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 MPP7Q5T2T1 576 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 TMEM215Q68D42 235 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 DENND1BQ6P3S1 775 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 RFWD3Q6PCD5 774 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-215ENST00000487401 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 AHI1Q8N157 1196 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 ZNF557Q8N988 423 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-215ENST00000487401 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
SREBF1-215ENST00000487401 CLEC4CQ8WTT0 213 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms