RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ZNF510Q9Y2H8 683 aa16.1■□□□□ 0.17
MCF2L-228ENST00000487354 C10orf142B7Z368 130 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 TLX3O43711 291 aaPredicted RBP16.09■□□□□ 0.17
MCF2L-228ENST00000487354 KLRC4O43908 158 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 TSPAN3O60637 253 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 CLSTN1O94985 981 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 HLA-DRAP01903 254 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 RPN1P04843 607 aaKnown RBP16.09■□□□□ 0.17
MCF2L-228ENST00000487354 ITPKBP27987 946 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 HLA-FP30511 346 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 CHKAP35790 457 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 GRK6P43250 576 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 PSEN1P49768 467 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 IL9RQ01113 521 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 AMPD3Q01432 767 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 EFEMP1Q12805 493 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 CUL4BQ13620 913 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 SERPINA13PQ6UXR4 307 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 BHLHA9Q7RTU4 235 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 DENND1CQ8IV53 801 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 SLC9A9Q8IVB4 645 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 ZNF366Q8N895 744 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 TAF4BQ92750 862 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 CIPCQ9C0C6 399 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 KCTD10Q9H3F6 313 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 ZNF462Q96JM2 2506 aa16.09■□□□□ 0.17
MCF2L-228ENST00000487354 PLK4O00444 970 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 SPTLC2O15270 562 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 PPP6R2O75170 966 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 IGHV4-34P06331 123 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 ACADMP11310 421 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 P4HA1P13674 534 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 CCT8P50990 548 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 RPS14P62263 151 aaKnown RBP16.08■□□□□ 0.16
MCF2L-228ENST00000487354 COG7P83436 770 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 STK38Q15208 465 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 PPP1R26Q5T8A7 1209 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-228ENST00000487354 ADIPOR2Q86V24 386 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 IQUBQ8NA54 791 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 PIP4K2CQ8TBX8 421 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 CYB5D2Q8WUJ1 264 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 UBL7Q96S82 380 aaPredicted RBP16.08■□□□□ 0.16
MCF2L-228ENST00000487354 DUSP16Q9BY84 665 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 SLC2A11Q9BYW1 496 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 PRORYQ9H606 182 aa16.08■□□□□ 0.16
MCF2L-228ENST00000487354 PVALEFA0A1B0GWK0 134 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 E9PAM4 449 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 CBX4O00257 560 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 STX6O43752 255 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 SEMA4FO95754 770 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 CD27P26842 260 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 ABCG1P45844 678 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 STK4Q13043 487 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 SUZ12Q15022 739 aaKnown RBP16.07■□□□□ 0.16
MCF2L-228ENST00000487354 SHBQ15464 509 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 RAB41Q5JT25 222 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 KIAA0907Q7Z7F0 614 aaPredicted RBP16.07■□□□□ 0.16
MCF2L-228ENST00000487354 TADA2BQ86TJ2 420 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 GRAMD1CQ8IYS0 662 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.07■□□□□ 0.16
MCF2L-228ENST00000487354 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 DCBLD2Q96PD2 775 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 DCLK3Q9C098 648 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 MAGEF1Q9HAY2 307 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 PRSS16Q9NQE7 514 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 MARCH2Q9P0N8 246 aa16.07■□□□□ 0.16
MCF2L-228ENST00000487354 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 RALAP11233 206 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 PIK3CAP42336 1068 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 SGSHP51688 502 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 TRIP4Q15650 581 aaPredicted RBP16.06■□□□□ 0.16
MCF2L-228ENST00000487354 CCDC157Q569K6 752 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 GOLGA5Q8TBA6 731 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 WFDC5Q8TCV5 224 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 TAS1R2Q8TE23 839 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 DDI1Q8WTU0 396 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 CDK5RAP1Q96SZ6 601 aaKnown RBP16.06■□□□□ 0.16
MCF2L-228ENST00000487354 EBF2Q9HAK2 575 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 RAI2Q9Y5P3 530 aa16.06■□□□□ 0.16
MCF2L-228ENST00000487354 A0A1B0GTQ1 180 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 SLC12A8A0AV02 714 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 EIF4E1BA6NMX2 242 aaKnown RBP16.05■□□□□ 0.16
MCF2L-228ENST00000487354 ATXN7O15265 892 aaPredicted RBP16.05■□□□□ 0.16
MCF2L-228ENST00000487354 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
MCF2L-228ENST00000487354 TIMM44O43615 452 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 CUTAO60888 179 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 NR3C1P04150 777 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 WNT1P04628 370 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 CD58P19256 250 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 EIF2S3P41091 472 aaKnown RBP16.05■□□□□ 0.16
MCF2L-228ENST00000487354 PPP3CAQ08209 521 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 TEAD4Q15561 434 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 PCSK4Q6UW60 755 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 TMPRSS12Q86WS5 348 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 GATAD2AQ86YP4 633 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 SLC39A7Q92504 469 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 PLD4Q96BZ4 506 aa16.05■□□□□ 0.16
MCF2L-228ENST00000487354 MYO19Q96H55 970 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms