RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 ZNF445P59923 1031 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 EFHC1Q5JVL4 640 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 RFWD3Q6PCD5 774 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 TMEM92Q6UXU6 159 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 APTXQ7Z2E3 356 aaKnown RBP23.29■■□□□ 1.32
CDHR3-212ENST00000487084 DEFB106AQ8N104 65 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 EPS8L1Q8TE68 723 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 FAM204AQ9H8W3 233 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 COX16Q9P0S2 106 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 STOML2Q9UJZ1 356 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 CLEC4EQ9ULY5 219 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 DAAM1Q9Y4D1 1078 aa23.29■■□□□ 1.32
CDHR3-212ENST00000487084 CCDC163A0A0D9SF12 145 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 ACSL4O60488 711 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 HSF2BPO75031 334 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 ADAM23O75077 832 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 RPP40O75818 363 aaKnown RBP23.28■■□□□ 1.32
CDHR3-212ENST00000487084 TRUB2O95900 331 aaKnown RBP23.28■■□□□ 1.32
CDHR3-212ENST00000487084 APOEP02649 317 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 STAT1P42224 750 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 JAM2P57087 298 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 PITX1P78337 314 aaPredicted RBP23.28■■□□□ 1.32
CDHR3-212ENST00000487084 NNTQ13423 1086 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 OLFML1Q6UWY5 402 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 CHPFQ8IZ52 775 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 DCLK2Q8N568 766 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 KCNV2Q8TDN2 545 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 SLC20A1Q8WUM9 679 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 GAB3Q8WWW8 586 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 DDX1Q92499 740 aaKnown RBP23.28■■□□□ 1.32
CDHR3-212ENST00000487084 TMA16Q96EY4 203 aaKnown RBP23.28■■□□□ 1.32
CDHR3-212ENST00000487084 ERGIC2Q96RQ1 377 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 FUCA2Q9BTY2 467 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 TPSD1Q9BZJ3 242 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 ASNSD1Q9NWL6 643 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 FBXO10Q9UK96 956 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 GMEB2Q9UKD1 530 aa23.28■■□□□ 1.32
CDHR3-212ENST00000487084 IRAK2O43187 625 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 ALDH1A2O94788 518 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 GLI1P08151 1106 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 HNRNPLP14866 589 aaKnown RBP eCLIP23.27■■□□□ 1.32
CDHR3-212ENST00000487084 HOXD9P28356 352 aaPredicted RBP23.27■■□□□ 1.32
CDHR3-212ENST00000487084 CDH5P33151 784 aaPredicted RBP23.27■■□□□ 1.32
CDHR3-212ENST00000487084 SGSHP51688 502 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 CDK17Q00537 523 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 SLC6A3Q01959 620 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 ANKS1BQ7Z6G8 1248 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.27■■□□□ 1.32
CDHR3-212ENST00000487084 ERICH1Q86X53 443 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 ERLEC1Q96DZ1 483 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 SLC2A13Q96QE2 648 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 POLMQ9NP87 494 aaPredicted RBP23.27■■□□□ 1.32
CDHR3-212ENST00000487084 BCCIPQ9P287 314 aaKnown RBP eCLIP23.27■■□□□ 1.32
CDHR3-212ENST00000487084 HCN2Q9UL51 889 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 SLC27A6Q9Y2P4 619 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 STARD13Q9Y3M8 1113 aa23.27■■□□□ 1.32
CDHR3-212ENST00000487084 EP300Q09472 2414 aaPredicted RBP23.27■■□□□ 1.31
CDHR3-212ENST00000487084 TCRBV21S2A2A0A5A6 115 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 TBL1XO60907 577 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 LSM8O95777 96 aaKnown RBP23.26■■□□□ 1.31
CDHR3-212ENST00000487084 HOXB2P14652 356 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 NTSR1P30989 418 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 SLC6A4P31645 630 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 GEN1Q17RS7 908 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 FAM133BQ5BKY9 247 aaKnown RBP23.26■■□□□ 1.31
CDHR3-212ENST00000487084 ZC3H12AQ5D1E8 599 aaKnown RBP23.26■■□□□ 1.31
CDHR3-212ENST00000487084 NAA35Q5VZE5 725 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 NADSYN1Q6IA69 706 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 SDE2Q6IQ49 451 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 MSANTD4Q8NCY6 345 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 CPA5Q8WXQ8 436 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 RNF34Q969K3 372 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 SLC39A13Q96H72 371 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 ACOX2Q99424 681 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 DDX50Q9BQ39 737 aaKnown RBP23.26■■□□□ 1.31
CDHR3-212ENST00000487084 DDIT4Q9NX09 232 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 EBF1Q9UH73 591 aa23.26■■□□□ 1.31
CDHR3-212ENST00000487084 DAB1O75553 588 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 GBP1P32455 592 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 RNASE9P60153 205 aaKnown RBP23.25■■□□□ 1.31
CDHR3-212ENST00000487084 ARID5AQ03989 594 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 C2CD6Q53TS8 623 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 PIK3R6Q5UE93 754 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 LAIR1Q6GTX8 287 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 SLC26A9Q7LBE3 791 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 CACNA2D4Q7Z3S7 1137 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 ZNF677Q86XU0 584 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 ZDHHC17Q8IUH5 632 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 PGBD3Q8N328 593 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 MDGA1Q8NFP4 955 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 HMGB4Q8WW32 186 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 AZIN2Q96A70 460 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 C18orf8Q96DM3 657 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 SLC2A11Q9BYW1 496 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 CIPCQ9C0C6 399 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 NUCKS1Q9H1E3 243 aaKnown RBP23.25■■□□□ 1.31
CDHR3-212ENST00000487084 CACNA2D2Q9NY47 1150 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 STIM2Q9P246 746 aa23.25■■□□□ 1.31
CDHR3-212ENST00000487084 NOCTQ9UK39 431 aaKnown RBP23.25■■□□□ 1.31
CDHR3-212ENST00000487084 OTOGLQ3ZCN5 2332 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms