RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 A8MVJ9 347 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 TAF5LO75529 589 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 DLDP09622 509 aaKnown RBP4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 EBLN1P0CF75 366 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 TMEM225BP0DP42 221 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 JUPP14923 745 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 PAX3P23760 479 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 CST5P28325 142 aaPredicted RBP4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 PCSK6P29122 969 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 AKT1P31749 480 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 GKP32189 559 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 PDE1AP54750 535 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 TPTEP56180 551 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 MTAPQ13126 283 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 TAF5Q15542 800 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 TRIM60Q495X7 471 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 PLAC9Q5JTB6 97 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 RAB11FIP2Q7L804 512 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 ZNF551Q7Z340 670 aaPredicted RBP4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 EVI5LQ96CN4 794 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 WDYHV1Q96HA8 205 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 ZSCAN31Q96LW9 406 aaPredicted RBP4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 DDX23Q9BUQ8 820 aaKnown RBP4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 EBF3Q9H4W6 596 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 SAGE1Q9NXZ1 904 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 SH3BP4Q9P0V3 963 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 KIF17Q9P2E2 1029 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 SRP68Q9UHB9 627 aaKnown RBP4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 NFU1Q9UMS0 254 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 GABRQQ9UN88 632 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 FER1L4A9Z1Z3 1794 aa4.06□□□□□ -1.76
SNRNP27-204ENST00000487029 KCNU1A8MYU2 1149 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 ZNF213O14771 459 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 PMPCBO75439 489 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM155BO75949 473 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 PBX1P40424 430 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 GSTM5P46439 218 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 DGKQP52824 942 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 SUMO2P61956 95 aaKnown RBP4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 POU5F1BQ06416 359 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 CYP1B1Q16678 543 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 ADCK5Q3MIX3 580 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 ALFQ53S48 1182 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 TMEM196Q5HYL7 178 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 PRAMEF17Q5VTA0 474 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 NFRKBQ6P4R8 1299 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 DPY19L3Q6ZPD9 716 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 WDR53Q7Z5U6 358 aaPredicted RBP4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 MOGAT3Q86VF5 341 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 SUGP1Q8IWZ8 645 aaKnown RBP4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 CLASRPQ8N2M8 674 aaKnown RBP4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 LRRC71Q8N4P6 559 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 RP9Q8TA86 221 aaKnown RBP4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 SCAMP5Q8TAC9 235 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 SPPL3Q8TCT6 385 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 THAP4Q8WY91 577 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 HMCESQ96FZ2 354 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 PRR25Q96S07 402 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 PRSS22Q9GZN4 317 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 ARHGEF3Q9NR81 526 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 SERTAD4Q9NUC0 356 aa4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 CCNL1Q9UK58 526 aaPredicted RBP4.05□□□□□ -1.76
SNRNP27-204ENST00000487029 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 SMIM35A0A1B0GVV1 85 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A18PA6NE21 464 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A16PA6NEW6 464 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A9PA6NNJ1 464 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 EFCAB8A8MWE9 144 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A5PA8MXJ8 464 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 PRRT4C9JH25 899 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 SMIM22K7EJ46 135 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 SPRY2O43597 315 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 PPP6R2O75170 966 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 RPP40O75818 363 aaKnown RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 TJP3O95049 919 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 TUBB4AP04350 444 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A15PP0C7V4 464 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FAM90A14PP0C7W9 464 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 CREB1P16220 341 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 DRD1P21728 446 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 ADD2P35612 726 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 MMP13P45452 471 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 MAPK9P45984 424 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 E2F1Q01094 437 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 LAMB3Q13751 1172 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 KCNJ12Q14500 433 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 BTBD16Q32M84 506 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 P3H1Q32P28 736 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 AASDHQ4L235 1098 aaPredicted RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 MIDNQ504T8 468 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 FBXO47Q5MNV8 452 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 MSANTD2Q6P1R3 559 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 DLK2Q6UY11 383 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 CYP26C1Q6V0L0 522 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 PIK3AP1Q6ZUJ8 805 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 Q6ZWC4 215 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 MEPCEQ7L2J0 689 aaKnown RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 PARS2Q7L3T8 475 aaKnown RBP4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 TRABD2AQ86V40 505 aa4.04□□□□□ -1.76
SNRNP27-204ENST00000487029 SIRT6Q8N6T7 355 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms