RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	ATP8A2	Q9NTI2	1148 aa		4.7	□□□□□ -1.66
SNRNP40-205	ENST00000486941	JKAMP	Q9P055	326 aa		4.7	□□□□□ -1.66
SNRNP40-205	ENST00000486941	DKK3	Q9UBP4	350 aa		4.7	□□□□□ -1.66
SNRNP40-205	ENST00000486941	EXOC6B	Q9Y2D4	811 aa		4.7	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TMX2	Q9Y320	296 aa		4.7	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZNF532	Q9HCE3	1301 aa		4.7	□□□□□ -1.66
SNRNP40-205	ENST00000486941	MCM3AP	O60318	1980 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TRIM43B	A6NCK2	446 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	GOLIM4	O00461	696 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	LATS1	O95835	1130 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PRKCG	P05129	697 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	IFIT2	P09913	472 aa	Known RBP	4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	NHLRC4	P0CG21	123 aa	Predicted RBP	4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CYP2D6	P10635	497 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	RARB	P10826	455 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	AKR1B1	P15121	316 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	COPB2	P35606	906 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TLE2	Q04725	743 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ICA1	Q05084	483 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	FAP	Q12884	760 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	KLF1	Q13351	362 aa	Predicted RBP	4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PLS1	Q14651	629 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TRIM60	Q495X7	471 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	C9orf50	Q5SZB4	431 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	C12orf60	Q5U649	245 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SPATS2	Q86XZ4	545 aa	Known RBP	4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	AMOTL1	Q8IY63	956 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SPICE1	Q8N0Z3	855 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZNF366	Q8N895	744 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SLC44A5	Q8NCS7	719 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	POC1B	Q8TC44	478 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	BAD	Q92934	168 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	KIF1BP	Q96EK5	621 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	DYNLL2	Q96FJ2	89 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CDX2	Q99626	313 aa	Predicted RBP	4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	IMPG2	Q9BZV3	1241 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SMOC2	Q9H3U7	446 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	IL1RAPL2	Q9NP60	686 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	XPNPEP3	Q9NQH7	507 aa		4.69	□□□□□ -1.66
SNRNP40-205	ENST00000486941	LAMA2	P24043	3122 aa	Known RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ROBO3	Q96MS0	1386 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	MYH4	Q9Y623	1939 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CCDC195	A0A1B0GUA6	201 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CCDC151	A5D8V7	595 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	VWA5A	O00534	786 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	HTRA2	O43464	458 aa	Predicted RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PRKAB2	O43741	272 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	NDUFS2	O75306	463 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	HMMR	O75330	724 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	MBD4	O95243	580 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PGK2	P07205	417 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CLTB	P09497	229 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	MTHFD1	P11586	935 aa	Known RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	EEF2	P13639	858 aa	Known RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	AKR1A1	P14550	325 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ADD2	P35612	726 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CDC42EP1	Q00587	391 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TLE1	Q04724	770 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	KCTD2	Q14681	263 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ANO1	Q5XXA6	986 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	C11orf87	Q6NUJ2	197 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZNF365	Q70YC5	407 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ANKRD33	Q7Z3H0	272 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	MAFA	Q8NHW3	353 aa	Predicted RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	KAT5	Q92993	513 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TTYH1	Q9H313	450 aa	Predicted RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ARMT1	Q9H993	441 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TDP1	Q9NUW8	608 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PAG1	Q9NWQ8	432 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	UNC80	Q8N2C7	3258 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZBED9	Q6R2W3	1325 aa		4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	GREB1L	Q9C091	1923 aa	Predicted RBP	4.68	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CYP2D7	A0A087X1C5	515 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ATP2A1	O14983	1001 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PGK1	P00558	417 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CD1A	P06126	327 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	JUP	P14923	745 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	FOSL2	P15408	326 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ITGB8	P26012	769 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	HSD3B2	P26439	372 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TOB1	P50616	345 aa	Predicted RBP	4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ACLY	P53396	1101 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	POU6F2	P78424	691 aa	Predicted RBP	4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZNF844	Q08AG5	666 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SBK1	Q52WX2	424 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZSCAN25	Q6NSZ9	544 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TAPT1	Q6NXT6	567 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	CTR9	Q6PD62	1173 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	ZNF66	Q6ZN08	573 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	PRPF38A	Q8NAV1	312 aa	Known RBP	4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	KLHDC9	Q8NEP7	349 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SNX19	Q92543	992 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	HAPLN3	Q96S86	360 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	SLF1	Q9BQI6	1058 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	TEX13B	Q9BXU2	312 aa		4.67	□□□□□ -1.66
SNRNP40-205	ENST00000486941	BOLA2	Q9H3K6	86 aa		4.67	□□□□□ -1.66

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