RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 FICDQ9BVA6 458 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 FRMD8Q9BZ67 464 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 NOD2Q9HC29 1040 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 NT5MQ9NPB1 228 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 ARHGEF38Q9NXL2 777 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 TRIM33Q9UPN9 1127 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SLC12A8A0AV02 714 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SPTLC1O15269 473 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 GMNNO75496 209 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 ERCC2P18074 760 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 STX1BP61266 288 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 LRRC52Q8N7C0 313 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 UBXN6Q9BZV1 441 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 DONSONQ9NYP3 566 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SOX11P35716 441 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 KPNA2P52292 529 aaKnown RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 KIF19Q2TAC6 998 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 RGMBQ6NW40 437 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 TAS2R42Q7RTR8 314 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 CTU1Q7Z7A3 348 aaKnown RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SLC26A7Q8TE54 656 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 PRCCQ92733 491 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 PIWIL1Q96J94 861 aaKnown RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 HSFY1Q96LI6 401 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 GOLGA8QA0A0J9YX86 632 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 GOLGA8OA6NCC3 632 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 GOLGA8NF8WBI6 632 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 PFDN6O15212 129 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 LGR5O75473 907 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 FBXO21O94952 628 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 NQO1P15559 274 aaKnown RBP13.61□□□□□ -0.23
HMGN1-216ENST00000486741 TUBP50607 506 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 LILRA4P59901 499 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 ACCSLQ4AC99 568 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SPDYCQ5MJ68 293 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 RMDN2Q96LZ7 410 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 TRIM62Q9BVG3 475 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 TMEM120AQ9BXJ8 343 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 LRRC40Q9H9A6 602 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 SLC17A7Q9P2U7 560 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 L3MBTL1Q9Y468 752 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 ANGPTL3Q9Y5C1 460 aa13.61□□□□□ -0.23
HMGN1-216ENST00000486741 NHSQ6T4R5 1651 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SMIM35A0A1B0GVV1 85 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 CCDC22O60826 627 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 TAC1P20366 129 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 CLCNKBP51801 687 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 MAPRE1Q15691 268 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 UBAP2Q5T6F2 1119 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 N4BP2L1Q5TBK1 243 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 TRABD2AQ86V40 505 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 TTC30AQ86WT1 665 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SCG3Q8WXD2 468 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 MECRQ9BV79 373 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 DMAP1Q9NPF5 467 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 DNAJC16Q9Y2G8 782 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SNX10Q9Y5X0 201 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 C2CD4BA6NLJ0 364 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 DNAJB2P25686 324 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 MATKP42679 507 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 ACAD11Q709F0 780 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 TRIM56Q9BRZ2 755 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SFMBT1Q9UHJ3 866 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 TCRBV7S3A2A0A539 114 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 AIM2O14862 343 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 MT-CO1P00395 513 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 ITGA9Q13797 1035 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 CYP1B1Q16678 543 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 SOWAHAQ2M3V2 549 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 RGS9BPQ6ZS82 235 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
HMGN1-216ENST00000486741 PDLIM7Q9NR12 457 aa13.6□□□□□ -0.23
HMGN1-216ENST00000486741 PRRG1O14668 218 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 SERPINB3P29508 390 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 MRPS5P82675 430 aaKnown RBP13.59□□□□□ -0.23
HMGN1-216ENST00000486741 NOMO1Q15155 1222 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 C12orf50Q8NA57 414 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-216ENST00000486741 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 CD101Q93033 1021 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-216ENST00000486741 MYLPFQ96A32 169 aa13.59□□□□□ -0.23
HMGN1-216ENST00000486741 CSPG4P5Q96PW8 444 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms