RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 MUC22E2RYF6 1773 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-215ENST00000485550 IGHV1OR15-9A0A0B4J2B8 117 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 TRIM49BA6NDI0 452 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 PRRT4C9JH25 899 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 RALAP11233 206 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 MAOBP27338 520 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 PMS1P54277 932 aaKnown RBP11.1□□□□□ -0.63
HMGN1-215ENST00000485550 RAD23BP54727 409 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CYP4F3Q08477 520 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 C19orf57Q0VDD7 668 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 EFEMP1Q12805 493 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 LRMPQ12912 555 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CBWD6Q4V339 395 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CBWD3Q5JTY5 395 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CBWD5Q5RIA9 395 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 ANKRD40Q6AI12 368 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 ISM2Q6H9L7 571 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 SLC36A4Q6YBV0 504 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 NUDT18Q6ZVK8 323 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CCDC186Q7Z3E2 898 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 PIGZQ86VD9 579 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CHPFQ8IZ52 775 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-215ENST00000485550 NDRG1Q92597 394 aaKnown RBP11.1□□□□□ -0.63
HMGN1-215ENST00000485550 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CCDC34Q96HJ3 373 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 TSG101Q99816 390 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 DNAI2Q9GZS0 605 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 PNPLA8Q9NP80 782 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CACNA2D2Q9NY47 1150 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 WDR35Q9P2L0 1181 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CYP8B1Q9UNU6 501 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 RAD54BQ9Y620 910 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
HMGN1-215ENST00000485550 CYSRT1A8MQ03 144 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 WASH3PC4AMC7 463 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 TULP2O00295 520 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 STX10O60499 249 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 STC2O76061 302 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 KLKB1P03952 638 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 HOXB2P14652 356 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 NTSR1P30989 418 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 DGKGP49619 791 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 ENPEPQ07075 957 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 SLC14A1Q13336 389 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-215ENST00000485550 SDE2Q6IQ49 451 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 TRMT11Q7Z4G4 463 aaKnown RBP11.09□□□□□ -0.63
HMGN1-215ENST00000485550 TADA2BQ86TJ2 420 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
HMGN1-215ENST00000485550 SLC6A17Q9H1V8 727 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 RMND1Q9NWS8 449 aa11.09□□□□□ -0.63
HMGN1-215ENST00000485550 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 SLC12A8A0AV02 714 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 GOLGA8CPA6NN73 597 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 CACNG3O60359 315 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 CBFA2T3O75081 653 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 C1QL1O75973 258 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 CISD3P0C7P0 127 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 CD19P15391 556 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 TKTL1P51854 596 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 GRIK2Q13002 908 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 GOLGA7BQ2TAP0 167 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 KLHDC10Q6PID8 442 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 Q6ZNB5 142 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 RSRC2Q7L4I2 434 aaKnown RBP11.08□□□□□ -0.64
HMGN1-215ENST00000485550 DENND1CQ8IV53 801 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 ANKRD52Q8NB46 1076 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 ENGASEQ8NFI3 743 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 UBA3Q8TBC4 463 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 KCNV2Q8TDN2 545 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 IPO4Q8TEX9 1081 aaKnown RBP11.08□□□□□ -0.64
HMGN1-215ENST00000485550 SETD7Q8WTS6 366 aaKnown RBP11.08□□□□□ -0.64
HMGN1-215ENST00000485550 SMARCE1Q969G3 411 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 ULBP1Q9BZM6 244 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 CLIC5Q9NZA1 410 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 MARK1Q9P0L2 795 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 PCOLCE2Q9UKZ9 415 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 STARD13Q9Y3M8 1113 aa11.08□□□□□ -0.64
HMGN1-215ENST00000485550 TRABD2BA6NFA1 517 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-215ENST00000485550 KALRNO60229 2985 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 NDUFS2O75306 463 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 SMC2O95347 1197 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 NDUFV2P19404 249 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 CORO1AP31146 461 aaKnown RBP11.07□□□□□ -0.64
HMGN1-215ENST00000485550 SLC8A3P57103 927 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 MCCD1P59942 119 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-215ENST00000485550 YWHAGP61981 247 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGN1-215ENST00000485550 COG7P83436 770 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 FKBP3Q00688 224 aaKnown RBP11.07□□□□□ -0.64
HMGN1-215ENST00000485550 PDE4CQ08493 712 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 CUL2Q13617 745 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 RAB41Q5JT25 222 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 TMPRSS7Q7RTY8 843 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 TTC39CQ8N584 583 aa11.07□□□□□ -0.64
HMGN1-215ENST00000485550 PIP4K2CQ8TBX8 421 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms