RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 FAM72DQ6L9T8 149 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 TAS1R1Q7RTX1 841 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 SCD5Q86SK9 330 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 FAM72BQ86X60 149 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 EPS8L3Q8TE67 593 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 SMOC2Q9H3U7 446 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 PSD3Q9NYI0 1048 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 TLDC2A0PJX2 215 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 HACD1B0YJ81 288 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 DGKIO75912 1065 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 TMEM63AO94886 807 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 LMAN1P49257 510 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 PGFP49763 221 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 ARL4CP56559 192 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 GPR17Q13304 367 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 HEATR6Q6AI08 1181 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 RSPO2Q6UXX9 243 aaPredicted RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 SPPL2BQ8TCT7 592 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 TFB1MQ8WVM0 346 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 VWCEQ96DN2 955 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 TTC25Q96NG3 672 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 EPAS1Q99814 870 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 OXCT2Q9BYC2 517 aaPredicted RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 NMUR1Q9HB89 426 aa17.28■□□□□ 0.36
CTSA-207ENST00000484855 XPO7Q9UIA9 1087 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 NOVA2Q9UNW9 492 aaKnown RBP17.28■□□□□ 0.36
CTSA-207ENST00000484855 TCRBV7S3A2A0A539 114 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 RASGRF2O14827 1237 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 DCLK1O15075 740 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 TBC1D4O60343 1298 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 ZNF135P52742 658 aaPredicted RBP17.27■□□□□ 0.36
CTSA-207ENST00000484855 GAD2Q05329 585 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 SMARCB1Q12824 385 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 PAFAH1B3Q15102 231 aaKnown RBP17.27■□□□□ 0.36
CTSA-207ENST00000484855 LRRC26Q2I0M4 334 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 RNF19BQ6ZMZ0 732 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 SEPT5Q99719 369 aaPredicted RBP17.27■□□□□ 0.36
CTSA-207ENST00000484855 ROPN1BQ9BZX4 212 aaPredicted RBP17.27■□□□□ 0.36
CTSA-207ENST00000484855 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 CWH43Q9H720 699 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 ROPN1Q9HAT0 212 aaPredicted RBP17.27■□□□□ 0.36
CTSA-207ENST00000484855 RAB6BQ9NRW1 208 aa17.27■□□□□ 0.36
CTSA-207ENST00000484855 SOAT2O75908 522 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 ERCC2P18074 760 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 HCAR3P49019 387 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 PDIA2Q13087 525 aaKnown RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 KCNJ11Q14654 390 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 FASTKD3Q14CZ7 662 aaKnown RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 MGAT5BQ3V5L5 792 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 FAM182AQ5T1J6 154 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 C6orf118Q5T5N4 469 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 PRSS55Q6UWB4 352 aaPredicted RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 KDM7AQ6ZMT4 941 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 ZBED8Q8IZ13 594 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 CCDC110Q8TBZ0 833 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 CASP10Q92851 521 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 PGM2Q96G03 612 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 OR12D3Q9UGF7 316 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 SFMBT1Q9UHJ3 866 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 SNX10Q9Y5X0 201 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 CHADO15335 359 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 RGS16O15492 202 aaPredicted RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 HPDP32754 393 aaPredicted RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 SLCO1A2P46721 670 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 USP46P62068 366 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 EIF4EBP2Q13542 120 aaPredicted RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 PDK1Q15118 436 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 BRMS1LQ5PSV4 323 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 C4orf22Q6V702 233 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 PDZD4Q76G19 769 aaPredicted RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 ARHGAP18Q8N392 663 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 GPR152Q8TDT2 470 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 PRDM5Q9NQX1 630 aaPredicted RBP17.26■□□□□ 0.35
CTSA-207ENST00000484855 ARHGEF38Q9NXL2 777 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 CDY1Q9Y6F8 540 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 SHROOM3Q8TF72 1996 aa17.26■□□□□ 0.35
CTSA-207ENST00000484855 ABHD14A-ACY1A0A1B0GW23 586 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 PPP1R12AO14974 1030 aaPredicted RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 MSI1O43347 362 aaKnown RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 ABHD2P08910 425 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 VAV1P15498 845 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 ATP1A2P50993 1020 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 MAGOHP61326 146 aaKnown RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 LONRF1Q17RB8 773 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 USP41Q3LFD5 358 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 HP1BP3Q5SSJ5 553 aaPredicted RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 DENND5BQ6ZUT9 1274 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 NETO2Q8NC67 525 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 C2orf15Q8WU43 125 aaKnown RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 HTR3CQ8WXA8 447 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 LGMNQ99538 433 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 OSER1Q9NX31 292 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.25■□□□□ 0.35
CTSA-207ENST00000484855 GMIPQ9P107 970 aa17.25■□□□□ 0.35
CTSA-207ENST00000484855 NUDT5Q9UKK9 219 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms