RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CYP11B1P15538 503 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 CDK11BP21127 795 aaKnown RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 HOXD9P28356 352 aaPredicted RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 SLC6A4P31645 630 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 NCAPHQ15003 741 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 ADGRF1Q5T601 910 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 NUGGCQ68CJ6 796 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 NADSYN1Q6IA69 706 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 NOP9Q86U38 636 aaKnown RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 CHPFQ8IZ52 775 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 PCMTD1Q96MG8 357 aaPredicted RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 SERPINB11Q96P15 392 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 HSD3B7Q9H2F3 369 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 SYNCQ9H7C4 482 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 POLMQ9NP87 494 aaPredicted RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 PARD6AQ9NPB6 346 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 CACNA2D2Q9NY47 1150 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
MSH5-216ENST00000484309 FBXO10Q9UK96 956 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 GON4LQ3T8J9 2241 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 ACSL4O60488 711 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 TBL1XO60907 577 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 GFPT2O94808 682 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 TRUB2O95900 331 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 ATP1A3P13637 1013 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 NTSR1P30989 418 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 GBP1P32455 592 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 BPIFB4P59827 614 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 YWHAZP63104 245 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 SYCP1Q15431 976 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 CCDC6Q16204 474 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 MPPE1Q53F39 396 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 FAM133BQ5BKY9 247 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 CACNA2D4Q7Z3S7 1137 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 TRMT11Q7Z4G4 463 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 ANKS1BQ7Z6G8 1248 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 RASSF3Q86WH2 238 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 DEFB106AQ8N104 65 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 FRMD1Q8N878 549 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 SORCS1Q8WY21 1168 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 TMA16Q96EY4 203 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 MYEOVQ96EZ4 313 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 NOX5Q96PH1 765 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 STK33Q9BYT3 514 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 LHX5Q9H2C1 402 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 STIM2Q9P246 746 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 XPO7Q9UIA9 1087 aaKnown RBP12.77□□□□□ -0.37
MSH5-216ENST00000484309 STOML2Q9UJZ1 356 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 CEP83Q9Y592 693 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 ADAMTS9Q9P2N4 1935 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 PI4KAP42356 2102 aa12.77□□□□□ -0.37
MSH5-216ENST00000484309 LGALS16A8MUM7 142 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 GFRA2O00451 464 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 IRAK2O43187 625 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 ALDH1A2O94788 518 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 LATS1O95835 1130 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 RETP07949 1114 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 MMEP08473 750 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 ZNF18P17022 549 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 BCKDHBP21953 392 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 SLC11A2P49281 568 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 UBXN1Q04323 297 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 RING1Q06587 406 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 PLK5Q496M5 336 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 ZC3H12AQ5D1E8 599 aaKnown RBP12.76□□□□□ -0.37
MSH5-216ENST00000484309 OLFML1Q6UWY5 402 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 WFDC5Q8TCV5 224 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 SLC39A13Q96H72 371 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
MSH5-216ENST00000484309 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
MSH5-216ENST00000484309 DUSP15Q9H1R2 295 aaPredicted RBP12.76□□□□□ -0.37
MSH5-216ENST00000484309 SLC6A17Q9H1V8 727 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 TLR6Q9Y2C9 796 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 SLC27A6Q9Y2P4 619 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 DOCK4Q8N1I0 1966 aa12.76□□□□□ -0.37
MSH5-216ENST00000484309 A0A1W2PQF6 199 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 HSF2BPO75031 334 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 DAB1O75553 588 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms