RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ERBB2P04626 1255 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 HOXB2P14652 356 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 SLC6A4P31645 630 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 BPIFB4P59827 614 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 PITX1P78337 314 aaPredicted RBP13.42□□□□□ -0.26
HDAC1-209ENST00000484305 MYL5Q02045 173 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 NCAPHQ15003 741 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 PLK5Q496M5 336 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 USP39Q53GS9 565 aaKnown RBP13.42□□□□□ -0.26
HDAC1-209ENST00000484305 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
HDAC1-209ENST00000484305 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 RFWD3Q6PCD5 774 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 BEND5Q7L4P6 421 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 TAC4Q86UU9 113 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 CHPFQ8IZ52 775 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 GPR161Q8N6U8 529 aaKnown RBP13.42□□□□□ -0.26
HDAC1-209ENST00000484305 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
HDAC1-209ENST00000484305 SLC39A13Q96H72 371 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 SERPINB11Q96P15 392 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 STK33Q9BYT3 514 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 SLC2A11Q9BYW1 496 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 DUSP15Q9H1R2 295 aaPredicted RBP13.42□□□□□ -0.26
HDAC1-209ENST00000484305 GANQ9H2C0 597 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 HSD3B7Q9H2F3 369 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 CD248Q9HCU0 757 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 USP18Q9UMW8 372 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 PLXND1Q9Y4D7 1925 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 NUP205Q92621 2012 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 CEP192Q8TEP8 1941 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 A0A1W2PQF6 199 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 FAM170AA1A519 330 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 F8VZ95 297 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 EPHB6O15197 1021 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 GRAP2O75791 330 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 TRUB2O95900 331 aaKnown RBP13.41□□□□□ -0.26
HDAC1-209ENST00000484305 TPM2P07951 284 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 CYP11B1P15538 503 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 GABRG2P18507 467 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 SLC11A2P49281 568 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 COPB1P53618 953 aaKnown RBP13.41□□□□□ -0.26
HDAC1-209ENST00000484305 ZNF445P59923 1031 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 TYRO3Q06418 890 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 NNTQ13423 1086 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 PTPN20Q4JDL3 420 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 DCAF6Q58WW2 860 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 PIK3R6Q5UE93 754 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 TMEM215Q68D42 235 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 SDE2Q6IQ49 451 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 KIAA1211LQ6NV74 962 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 FAM183BPQ6ZVS7 135 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 FRMD1Q8N878 549 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 RLN3Q8WXF3 142 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 DDX1Q92499 740 aaKnown RBP13.41□□□□□ -0.26
HDAC1-209ENST00000484305 AZIN2Q96A70 460 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 NOX5Q96PH1 765 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 GABRG3Q99928 467 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 TRIM62Q9BVG3 475 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 ARRDC1-AS1Q9H2J1 176 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 FAM207AQ9NSI2 230 aaPredicted RBP13.41□□□□□ -0.26
HDAC1-209ENST00000484305 BCCIPQ9P287 314 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC1-209ENST00000484305 LIMA1Q9UHB6 759 aaKnown RBP13.41□□□□□ -0.26
HDAC1-209ENST00000484305 RAD54BQ9Y620 910 aa13.41□□□□□ -0.26
HDAC1-209ENST00000484305 LRRC10BA6NIK2 292 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 IRAK2O43187 625 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 LRP3O75074 770 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 EPN2O95208 641 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 IGLV3-25P01717 112 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 ZNF18P17022 549 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 BCKDHBP21953 392 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 HLA-FP30511 346 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 GBP1P32455 592 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 CDH5P33151 784 aaPredicted RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 POLR2FP61218 127 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 EIF4EBP2Q13542 120 aaPredicted RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 CCDC6Q16204 474 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 ZC3H12AQ5D1E8 599 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 EFHC1Q5JVL4 640 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 FKBP15Q5T1M5 1219 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 TAF3Q5VWG9 929 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 OR6B2Q6IFH4 312 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 OLFML1Q6UWY5 402 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 ANKS1BQ7Z6G8 1248 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 NOP9Q86U38 636 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 DEFB106AQ8N104 65 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 PGBD3Q8N328 593 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 WFDC5Q8TCV5 224 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
HDAC1-209ENST00000484305 SORCS1Q8WY21 1168 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 RMDN1Q96DB5 314 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 MYEOVQ96EZ4 313 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 SLC2A13Q96QE2 648 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
HDAC1-209ENST00000484305 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms