RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
PCCB-217ENST00000484181 PYROXD2Q8N2H3 581 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 ARHGAP18Q8N392 663 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 TAB3Q8N5C8 712 aaPredicted RBP17.12■□□□□ 0.33
PCCB-217ENST00000484181 RNF34Q969K3 372 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 CHMP6Q96FZ7 201 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 SPATA13Q96N96 652 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 CYTH2Q99418 400 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 ZCWPW1Q9H0M4 648 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 CCDC134Q9H6E4 229 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 WDR6Q9NNW5 1121 aaKnown RBP17.12■□□□□ 0.33
PCCB-217ENST00000484181 RSPH14Q9UHP6 348 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 CLUHO75153 1309 aa17.12■□□□□ 0.33
PCCB-217ENST00000484181 TMEM120BA0PK00 339 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 POC1B-GALNT4F8VUJ3 575 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 MFSD11O43934 449 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 BRAFP15056 766 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 KRT15P19012 456 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 CCT5P48643 541 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 CDK7P50613 346 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 PITX1P78337 314 aaPredicted RBP17.11■□□□□ 0.33
PCCB-217ENST00000484181 PRKD1Q15139 912 aaPredicted RBP17.11■□□□□ 0.33
PCCB-217ENST00000484181 BRMS1LQ5PSV4 323 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 BTBD8Q5XKL5 378 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 ZNF280DQ6N043 979 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 C3orf62Q6ZUJ4 267 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 FAM126BQ8IXS8 530 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 CCDC110Q8TBZ0 833 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 ZNF473Q8WTR7 871 aaKnown RBP17.11■□□□□ 0.33
PCCB-217ENST00000484181 CCT8L2Q96SF2 557 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 OXCT2Q9BYC2 517 aaPredicted RBP17.11■□□□□ 0.33
PCCB-217ENST00000484181 KCNK9Q9NPC2 374 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 EIF2B3Q9NR50 452 aaKnown RBP17.11■□□□□ 0.33
PCCB-217ENST00000484181 EURLQ9NYK6 297 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 CTNNAL1Q9UBT7 734 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 TBK1Q9UHD2 729 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 SMG5Q9UPR3 1016 aaKnown RBP17.11■□□□□ 0.33
PCCB-217ENST00000484181 TRIM17Q9Y577 477 aa17.11■□□□□ 0.33
PCCB-217ENST00000484181 OR6C75A6NL08 312 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 DDHD2O94830 711 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 ITGB1P05556 798 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 SLC5A3P53794 718 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 YWHAGP61981 247 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCCB-217ENST00000484181 SEMA5AQ13591 1074 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 PLEKHG4Q58EX7 1191 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 HP1BP3Q5SSJ5 553 aaPredicted RBP17.1■□□□□ 0.33
PCCB-217ENST00000484181 CAPN12Q6ZSI9 719 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 ZNF280BQ86YH2 543 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 SRRM1Q8IYB3 904 aaKnown RBP17.1■□□□□ 0.33
PCCB-217ENST00000484181 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 SMC6Q96SB8 1091 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 RHOBTB2Q9BYZ6 727 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 TMEM30AQ9NV96 361 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 TMLHEQ9NVH6 421 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 CHMP2BQ9UQN3 213 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 TCRBV7S3A2A0A539 114 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 DCLK1O15075 740 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 MAP3K6O95382 1288 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 CPP00450 1065 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 ELK3P41970 407 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 MSH2P43246 934 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 AP1B1Q10567 949 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 SLC10A2Q12908 348 aaPredicted RBP17.1■□□□□ 0.33
PCCB-217ENST00000484181 SEMA3BQ13214 749 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 CPLX4Q7Z7G2 160 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 TAC4Q86UU9 113 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 CCNYQ8ND76 341 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 ADAM32Q8TC27 787 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 DQX1Q8TE96 717 aaKnown RBP17.1■□□□□ 0.33
PCCB-217ENST00000484181 ATXN2LQ8WWM7 1075 aaKnown RBP17.1■□□□□ 0.33
PCCB-217ENST00000484181 EDEM1Q92611 657 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 TKTL2Q9H0I9 626 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 GGA2Q9UJY4 613 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 PRG3Q9Y2Y8 225 aaPredicted RBP17.1■□□□□ 0.33
PCCB-217ENST00000484181 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 TEX264Q9Y6I9 313 aa17.1■□□□□ 0.33
PCCB-217ENST00000484181 COL4A4P53420 1690 aaPredicted RBP17.09■□□□□ 0.33
PCCB-217ENST00000484181 PATJQ8NI35 1801 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 MLNP12872 115 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 MAGEA11P43364 429 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 SLC18A1P54219 525 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 GPX6P59796 221 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 COG7P83436 770 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 MSS51Q4VC12 460 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 ANKRD20A2Q5SQ80 823 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 ANKRD20A1Q5TYW2 823 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 GKAP1Q5VSY0 366 aaPredicted RBP17.09■□□□□ 0.33
PCCB-217ENST00000484181 ANKRD20A3Q5VUR7 823 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 LRRTM3Q86VH5 581 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 FBF1Q8TES7 1133 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 MAML1Q92585 1016 aa17.09■□□□□ 0.33
PCCB-217ENST00000484181 C8orf48Q96LL4 319 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms