RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ENAMQ9NRM1 1142 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 RXFP3Q9NSD7 469 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TMLHEQ9NVH6 421 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 GDAP2Q9NXN4 497 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 RBAKQ9NYW8 714 aaPredicted RBP6.27□□□□□ -1.41
CSDE1-207ENST00000483407 EHD2Q9NZN4 543 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 CRIM1Q9NZV1 1036 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 EBF1Q9UH73 591 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 GTF3C4Q9UKN8 822 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 ITGA11Q9UKX5 1188 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 L1RE1Q9UN81 338 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 SNX9Q9Y5X1 595 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 WNT6Q9Y6F9 365 aa6.27□□□□□ -1.41
CSDE1-207ENST00000483407 TRIP11Q15643 1979 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 FLNBO75369 2602 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 BCLAF3A2AJT9 711 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 MYMKA6NI61 221 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 KIAA0391O15091 583 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 TADA3O75528 432 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ALDH1A2O94788 518 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 WISP1O95388 367 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 IDEP14735 1019 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ACAT1P24752 427 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 HSD3B2P26439 372 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ANXA13P27216 316 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 NTF4P34130 210 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 MAGEA11P43364 429 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 NOVA1P51513 510 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 RAC1P63000 192 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 GRIN1Q05586 938 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 MAPRE1Q15691 268 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ZBTB37Q5TC79 503 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 RRAGBQ5VZM2 374 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF385CQ66K41 422 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 TCEAL6Q6IPX3 200 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 VSTM1Q6UX27 236 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 STXBP4Q6ZWJ1 553 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 MCATQ8IVS2 390 aaKnown RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ARL14EPQ8N8R7 260 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 RIN3Q8TB24 985 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 TCEAL3Q969E4 200 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 SAAL1Q96ER3 474 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ANKRD36BP1Q96IX9 119 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 EPSTI1Q96J88 318 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 CEP295NLQ96MC4 621 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 CYP2S1Q96SQ9 504 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 OLFML3Q9NRN5 406 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 TRPM5Q9NZQ8 1165 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 TBC1D7Q9P0N9 293 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 MAGEC2Q9UBF1 373 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-207ENST00000483407 CDH9Q9ULB4 789 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 ARHGAP26Q9UNA1 814 aa6.26□□□□□ -1.41
CSDE1-207ENST00000483407 MAP1BP46821 2468 aaKnown RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 VPS37CA5D8V6 355 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GOLGA8IPA6NC78 632 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 C2orf78A6NCI8 922 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GOLGA8JA6NMD2 632 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 C4orf47A7E2U8 309 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 SLC9A3R1O14745 358 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GABRDO14764 452 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 DCLK1O15075 740 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GJB6O95452 261 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 TNNC2P02585 160 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 PROS1P07225 676 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GRIK1P39086 918 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 PPP3CCP48454 512 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 ETF1P62495 437 aaKnown RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 CYP27A1Q02318 531 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 TCEAL1Q15170 157 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 SURF1Q15526 300 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 SOWAHAQ2M3V2 549 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 HSF5Q4G112 596 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 C2orf27AQ580R0 203 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 PMS2CLQ68D20 193 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 LMBRD2Q68DH5 695 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 NAIF1Q69YI7 327 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 ANO7Q6IWH7 933 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 FAM171BQ6P995 826 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 CCDC73Q6ZRK6 1079 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF662Q6ZS27 426 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 DENND5BQ6ZUT9 1274 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 TTC30AQ86WT1 665 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 GPD1LQ8N335 351 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 KIAA1958Q8N8K9 716 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 USP33Q8TEY7 942 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 MYLPFQ96A32 169 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 HPDLQ96IR7 371 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 SPATA17Q96L03 361 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 CNOT6LQ96LI5 555 aaKnown RBP6.25□□□□□ -1.41
CSDE1-207ENST00000483407 FANCD2OSQ96PS1 177 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 SLC22A12Q96S37 553 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 DNAJC7Q99615 494 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 PKMYT1Q99640 499 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 SYT15Q9BQS2 421 aa6.25□□□□□ -1.41
CSDE1-207ENST00000483407 CBWD1Q9BRT8 395 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms