RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.52■□□□□ 0.562e-10■□□□□ 11.3
CPNE1-224ENST00000483359 UVRAGQ9P2Y5 699 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 DUSP12Q9UNI6 340 aa18.52■□□□□ 0.56
CPNE1-224ENST00000483359 TMEM110-MUSTN1A8MSY1 372 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 TRDMT1O14717 391 aaKnown RBP18.51■□□□□ 0.55
CPNE1-224ENST00000483359 SLC34A2O95436 690 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 F9P00740 461 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 DESP17661 470 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 VAV2P52735 878 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 TPGS1Q6ZTW0 290 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 STRADAQ7RTN6 431 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 DCLK3Q9C098 648 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 LACRTQ9GZZ8 138 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 TBC1D14Q9P2M4 693 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 GOLGA6L7A0A1B0GV03 622 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 OTOL1A6NHN0 477 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-224ENST00000483359 MYO1FO00160 1098 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 ARNTLO00327 626 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 SRFP11831 508 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 NOP2P46087 812 aaKnown RBP18.51■□□□□ 0.55
CPNE1-224ENST00000483359 SLC11A2P49281 568 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 CXCR3P49682 368 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 RHOT2Q8IXI1 618 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 CENPIQ92674 756 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-224ENST00000483359 IRF7Q92985 503 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 DUSP10Q9Y6W6 482 aa18.51■□□□□ 0.55
CPNE1-224ENST00000483359 I6L893 689 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-224ENST00000483359 SLC9A3R1O14745 358 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-224ENST00000483359 SLC2A3P11169 496 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 PPP2R5DQ14738 602 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 IER5LQ5T953 404 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 NADSYN1Q6IA69 706 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 RFWD3Q6PCD5 774 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 CPNE8Q86YQ8 564 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 CCDC185Q8N715 623 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ATP2A3Q93084 1043 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 TRIM10Q9UDY6 481 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ADGRG1Q9Y653 693 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 COL4A3Q01955 1670 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 KCNU1A8MYU2 1149 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 BUB1O43683 1085 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ACSL4O60488 711 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 TSPAN3O60637 253 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 RNF8O76064 485 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ENDOD1O94919 500 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 CYP17A1P05093 508 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 SOX9P48436 509 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 RUNX3Q13761 415 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 MESDQ14696 234 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 PDGFRLQ15198 375 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 RAP1GAP2Q684P5 730 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ADGRG2Q8IZP9 1017 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ARFGAP1Q8N6T3 406 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ATP6V0D2Q8N8Y2 350 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 CSGALNACT1Q8TDX6 532 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 BTN2A3PQ96KV6 586 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 PPP1R9BQ96SB3 815 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 SIK2Q9H0K1 926 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 HEBP1Q9NRV9 189 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 PCSK1NQ9UHG2 260 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 IP6K2Q9UHH9 426 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 ZNF510Q9Y2H8 683 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 PAXBP1Q9Y5B6 917 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 SNX10Q9Y5X0 201 aa18.5■□□□□ 0.55
CPNE1-224ENST00000483359 LRCH4O75427 683 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 PAGE1O75459 146 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 NFATC1O95644 943 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 TCF4P15884 667 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 SLC6A4P31645 630 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 ANO4Q32M45 955 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 FAM133BQ5BKY9 247 aaKnown RBP18.49■□□□□ 0.55
CPNE1-224ENST00000483359 BRMS1LQ5PSV4 323 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 LY6G5CQ5SRR4 150 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 PIK3R6Q5UE93 754 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 CHSY1Q86X52 802 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 ECT2Q9H8V3 914 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 ARHGEF38Q9NXL2 777 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 PLK2Q9NYY3 685 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 SLC12A6Q9UHW9 1150 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 SALL4Q9UJQ4 1053 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 COL4A2P08572 1712 aa18.49■□□□□ 0.55
CPNE1-224ENST00000483359 SSR1P43307 286 aaKnown RBP18.48■□□□□ 0.55
CPNE1-224ENST00000483359 NAP1L1P55209 391 aaKnown RBP18.48■□□□□ 0.55
CPNE1-224ENST00000483359 PIGHQ14442 188 aaPredicted RBP18.48■□□□□ 0.55
CPNE1-224ENST00000483359 DHCR24Q15392 516 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 ADGRF1Q5T601 910 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 TMEM25Q86YD3 366 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 OTUB2Q96DC9 234 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 CA14Q9ULX7 337 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 HS3ST4Q9Y661 456 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 MACROD2A1Z1Q3 448 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 NEDD8-MDP1E9PL57 170 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 CHKAP35790 457 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 SGSHP51688 502 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 KIF5AQ12840 1032 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 MS4A13Q5J8X5 152 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 RHBDF2Q6PJF5 856 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 CPA6Q8N4T0 437 aa18.48■□□□□ 0.55
CPNE1-224ENST00000483359 MYEOVQ96EZ4 313 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms