RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 HMGB4Q8WW32 186 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 GBP4Q96PP9 640 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 ZDHHC4Q9NPG8 344 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 INVSQ9Y283 1065 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 MYO18AQ92614 2054 aaKnown RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 CEP250Q9BV73 2442 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 SDK1Q7Z5N4 2213 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 BCLAF3A2AJT9 711 aaKnown RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 CAVIN2O95810 425 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 PENKP01210 267 aaPredicted RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 KLKB1P03952 638 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 CISD3P0C7P0 127 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 HOXB2P14652 356 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 P2RY2P41231 377 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 HARS2P49590 506 aaKnown RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 E2F5Q15329 346 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 SF3A2Q15428 464 aaKnown RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 FYB2Q5VWT5 728 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 IL31Q6EBC2 164 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 DENND1CQ8IV53 801 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 CHPFQ8IZ52 775 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 PRR7Q8TB68 274 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 HSFY1Q96LI6 401 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 ABCC13Q9NSE7 274 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 PLK2Q9NYY3 685 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 AGO1Q9UL18 857 aaKnown RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 SLC27A6Q9Y2P4 619 aa13.38□□□□□ -0.27
COL21A1-209ENST00000482933 HBS1LQ9Y450 684 aaKnown RBP13.38□□□□□ -0.27
COL21A1-209ENST00000482933 PRRT4C9JH25 899 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 J3QL48 77 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 M0QYV0 167 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 GFRA2O00451 464 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 LCP1P13796 627 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 BCKDHBP21953 392 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 ZNF445P59923 1031 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 TRIP4Q15650 581 aaPredicted RBP13.37□□□□□ -0.27
COL21A1-209ENST00000482933 SPDYCQ5MJ68 293 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 EGFLAMQ63HQ2 1017 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 TOGARAM2Q6ZUX3 1019 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 RRAGAQ7L523 313 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 LPCAT2Q7L5N7 544 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 BHLHA9Q7RTU4 235 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 FMNL3Q8IVF7 1028 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 RBBP8NLQ8NC74 664 aaPredicted RBP13.37□□□□□ -0.27
COL21A1-209ENST00000482933 SLC35F5Q8WV83 523 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 UCMAQ8WVF2 138 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 NDRG1Q92597 394 aaKnown RBP13.37□□□□□ -0.27
COL21A1-209ENST00000482933 GOLGA1Q92805 767 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 BHMTQ93088 406 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 FAM81BQ96LP2 452 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL21A1-209ENST00000482933 THADAQ6YHU6 1953 aa13.37□□□□□ -0.27
COL21A1-209ENST00000482933 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
COL21A1-209ENST00000482933 NPC1O15118 1278 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 DPP6P42658 865 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 WASP42768 502 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 DHPSP49366 369 aaPredicted RBP13.36□□□□□ -0.27
COL21A1-209ENST00000482933 DAOAP59103 153 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 CYP2U1Q7Z449 544 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
COL21A1-209ENST00000482933 DDI1Q8WTU0 396 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 RLN3Q8WXF3 142 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 IRGQQ8WZA9 623 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 KAT5Q92993 513 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 GABRG3Q99928 467 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 SMOC1Q9H4F8 434 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 SFMBT1Q9UHJ3 866 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 RWDD2AQ9UIY3 292 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 HCN2Q9UL51 889 aa13.36□□□□□ -0.27
COL21A1-209ENST00000482933 ABCA7Q8IZY2 2146 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 YJEFN3A6XGL0 299 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 E7ENQ6 273 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 ZNF217O75362 1048 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 FBXO21O94952 628 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 LATS1O95835 1130 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 GABRG2P18507 467 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
COL21A1-209ENST00000482933 RGS7P49802 495 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 ZNF132P52740 706 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 MFAP3P55082 362 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 CAMK4Q16566 473 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 MPPE1Q53F39 396 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 RNF43Q68DV7 783 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 PMF1Q6P1K2 205 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 SLC36A4Q6YBV0 504 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 ENOSF1Q7L5Y1 443 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 ARHGEF19Q8IW93 802 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 FAM217AQ8IXS0 508 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 EDEM1Q92611 657 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 ACOX2Q99424 681 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 SLC2A11Q9BYW1 496 aa13.35□□□□□ -0.27
COL21A1-209ENST00000482933 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms