RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 NOMO1Q15155 1222 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 TTC39BQ5VTQ0 682 aaPredicted RBP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 ZFP28Q8NHY6 868 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 FNDC8Q8TC99 324 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 LRRN4Q8WUT4 740 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 USP6NLQ92738 828 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 SLX1AQ9BQ83 275 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 LIN28AQ9H9Z2 209 aaKnown RBP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 UGT1A7Q9HAW7 530 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 UGT1A10Q9HAW8 530 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 UGT1A8Q9HAW9 530 aa12.8□□□□□ -0.36
CCDC78-213ENST00000482878 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 HEMK1Q9Y5R4 338 aaPredicted RBP12.8□□□□□ -0.36
CCDC78-213ENST00000482878 KIAA1217Q5T5P2 1943 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 KLF11O14901 512 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TM7SF2O76062 418 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 OAZ1P54368 228 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 YWHAZP63104 245 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 STXBP2Q15833 593 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 DNAL1Q4LDG9 190 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 CYP4V2Q6ZWL3 525 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 POU5F2Q8N7G0 328 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 ZNF280CQ8ND82 737 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 RSAD1Q9HA92 442 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 S100A14Q9HCY8 104 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 HEY1Q9Y5J3 304 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 CCDC195A0A1B0GUA6 201 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 CAPN14A8MX76 684 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 PIK3R2O00459 728 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 BMPR2Q13873 1038 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 PAOXQ6QHF9 649 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 ARID3BQ8IVW6 561 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 DIS3LQ8TF46 1054 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 GFM2Q969S9 779 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TRIM56Q9BRZ2 755 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 ELP3Q9H9T3 547 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 SMYD2Q9NRG4 433 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 PLLPQ9Y342 182 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 H7C0C1 242 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 MED7O43513 233 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 MAFO75444 373 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 PRKCBP05771 671 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TFPTP0C1Z6 253 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
CCDC78-213ENST00000482878 ATP5OP48047 213 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 EFHC1Q5JVL4 640 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 TRNP1Q6NT89 227 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 NLRP4Q96MN2 994 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 Q9H521 79 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 DMTF1Q9Y222 760 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 DTNAQ9Y4J8 743 aa12.79□□□□□ -0.36
CCDC78-213ENST00000482878 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CHADO15335 359 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 RFPL1O75677 317 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 NFKBIAP25963 317 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 ICAM3P32942 547 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 HALP42357 657 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 TMPRSS15P98073 1019 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CYTH1Q15438 398 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 TMEM192Q8IY95 271 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 LRRC71Q8N4P6 559 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SLC4A11Q8NBS3 891 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 ACAP3Q96P50 834 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 C20orf27Q9GZN8 174 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 POPDC2Q9HBU9 364 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 NRBP2Q9NSY0 501 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 KCNK4Q9NYG8 393 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 THEGQ9P2T0 379 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 AFG3L2Q9Y4W6 797 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 CSADQ9Y600 493 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 MYH9P35579 1960 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 KCNN4O15554 427 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SPAG6O75602 509 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 MICAL2O94851 1124 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 ENDOD1O94919 500 aa12.78□□□□□ -0.36
CCDC78-213ENST00000482878 SNRPAP09012 282 aaKnown RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 PORP16435 677 aaPredicted RBP12.78□□□□□ -0.36
CCDC78-213ENST00000482878 STAT5BP51692 787 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms