RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ZNF571Q7Z3V5 609 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-214ENST00000482733 VPS36Q86VN1 386 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 C12orf40Q86WS4 652 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 VSTM4Q8IW00 320 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 SPEM1Q8N4L4 309 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 NAT16Q8N8M0 369 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 ATP6V0D2Q8N8Y2 350 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 DDI1Q8WTU0 396 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 NT5C3BQ969T7 300 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 VCPIP1Q96JH7 1222 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 BTN2A3PQ96KV6 586 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 NPY6RQ99463 290 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 DNAJC17Q9NVM6 304 aaKnown RBP17.24■□□□□ 0.35
HMGN1-214ENST00000482733 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 PAXBP1Q9Y5B6 917 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 M0QYT0 321 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 SERPING1P05155 500 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 GZMAP12544 262 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 ABCB4P21439 1286 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 CASP14P31944 242 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 TNFRSF4P43489 277 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 SULT1E1P49888 294 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 CCR3P51677 355 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-214ENST00000482733 ANGPT1Q15389 498 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 SLC25A52Q3SY17 297 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 SND1Q7KZF4 910 aaKnown RBP eCLIP17.23■□□□□ 0.35
HMGN1-214ENST00000482733 MON1BQ7L1V2 547 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 PRSS33Q8NF86 280 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 RNF34Q969K3 372 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 TMA16Q96EY4 203 aaKnown RBP17.23■□□□□ 0.35
HMGN1-214ENST00000482733 PGAP3Q96FM1 320 aaPredicted RBP17.23■□□□□ 0.35
HMGN1-214ENST00000482733 SLC2A11Q9BYW1 496 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 METTL5Q9NRN9 209 aaKnown RBP17.23■□□□□ 0.35
HMGN1-214ENST00000482733 FBXO10Q9UK96 956 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 FBXO4Q9UKT5 387 aa17.23■□□□□ 0.35
HMGN1-214ENST00000482733 KMT2EQ8IZD2 1858 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 ZNF318Q5VUA4 2279 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 FAM170AA1A519 330 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 TYW5A2RUC4 315 aaKnown RBP17.22■□□□□ 0.35
HMGN1-214ENST00000482733 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 CHURC1-FNTBB4DL54 471 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 GFRA2O00451 464 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 RNF40O75150 1001 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 MOCS2O96007 188 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-214ENST00000482733 KRT3P12035 628 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 SKILP12757 684 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 FLT3P36888 993 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 DGKGP49619 791 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 NME3Q13232 169 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 TDRD12Q587J7 1177 aaKnown RBP17.22■□□□□ 0.35
HMGN1-214ENST00000482733 MPP7Q5T2T1 576 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 Q6ZS52 159 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 MCOLN2Q8IZK6 566 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 PHTF2Q8N3S3 785 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 ZNF557Q8N988 423 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-214ENST00000482733 KCNV2Q8TDN2 545 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 SELENOOQ9BVL4 669 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 TRIM5Q9C035 493 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
HMGN1-214ENST00000482733 KCNU1A8MYU2 1149 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 K7EQS6 105 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 CXCL12P48061 93 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 MRPS21P82921 87 aaKnown RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 DEUP1Q05D60 604 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 KDSRQ06136 332 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 TCF15Q12870 199 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 GAS6Q14393 721 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 TSR1Q2NL82 804 aaKnown RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 BRMS1LQ5PSV4 323 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 PIK3R6Q5UE93 754 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 HGSNATQ68CP4 663 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 DNAJC24Q6P3W2 148 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 TERB1Q8NA31 727 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 HJURPQ8NCD3 748 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 BHMTQ93088 406 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 ACDQ96AP0 544 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 PRMT8Q9NR22 394 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-214ENST00000482733 PLK2Q9NYY3 685 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 SLC27A6Q9Y2P4 619 aa17.21■□□□□ 0.35
HMGN1-214ENST00000482733 GOLGA6L7A0A1B0GV03 622 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 ANKRD62A6NC57 917 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 SIGLEC16A6NMB1 481 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.346e-16■■■■□ 25.2
HMGN1-214ENST00000482733 TSPAN3O60637 253 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 RTN2O75298 545 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 PAPSS2O95340 614 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-214ENST00000482733 CISD3P0C7P0 127 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 PDGFRAP16234 1089 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 SDC4P31431 198 aa17.2■□□□□ 0.34
HMGN1-214ENST00000482733 RDXP35241 583 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms