RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 C12orf40Q86WS4 652 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 GAS2L3Q86XJ1 694 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 DDI1Q8WTU0 396 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 BHMTQ93088 406 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 NT5C3BQ969T7 300 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 VCPIP1Q96JH7 1222 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 NPY6RQ99463 290 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 IRX2Q9BZI1 471 aaPredicted RBP21.73■■□□□ 1.07
SEC13-217ENST00000482647 ARHGEF4Q9NR80 690 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 COX16Q9P0S2 106 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 TMCO5BA8MYB1 307 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 CACNG3O60359 315 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 KAT7O95251 611 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 PENKP01210 267 aaPredicted RBP21.72■■□□□ 1.07
SEC13-217ENST00000482647 APODP05090 189 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 KRT3P12035 628 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 ABCB4P21439 1286 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 GRIA2P42262 883 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 SULT1E1P49888 294 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 MTAPQ13126 283 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 MTA1Q13330 715 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 TDRD12Q587J7 1177 aaKnown RBP21.72■■□□□ 1.07
SEC13-217ENST00000482647 HGSNATQ68CP4 663 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 NUDT18Q6ZVK8 323 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 SND1Q7KZF4 910 aaKnown RBP eCLIP21.72■■□□□ 1.07
SEC13-217ENST00000482647 C1orf210Q8IVY1 113 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 DRC7Q8IY82 874 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 MCOLN2Q8IZK6 566 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 C3orf20Q8ND61 904 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 OLIG1Q8TAK6 271 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 TMA16Q96EY4 203 aaKnown RBP21.72■■□□□ 1.07
SEC13-217ENST00000482647 BTN2A3PQ96KV6 586 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 METTL5Q9NRN9 209 aaKnown RBP21.72■■□□□ 1.07
SEC13-217ENST00000482647 DNAJC17Q9NVM6 304 aaKnown RBP21.72■■□□□ 1.07
SEC13-217ENST00000482647 TAS2R14Q9NYV8 317 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 PLK2Q9NYY3 685 aa21.72■■□□□ 1.07
SEC13-217ENST00000482647 A0A0A0MRY4 1105 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 KCNU1A8MYU2 1149 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 DDX3XO00571 662 aaKnown RBP eCLIP21.71■■□□□ 1.07
SEC13-217ENST00000482647 AP5Z1O43299 807 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 MOCS2O96007 188 aaPredicted RBP21.71■■□□□ 1.07
SEC13-217ENST00000482647 FLT3P36888 993 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 PPP2R5DQ14738 602 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 TSR1Q2NL82 804 aaKnown RBP21.71■■□□□ 1.07
SEC13-217ENST00000482647 FYB2Q5VWT5 728 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 GRAMD4Q6IC98 578 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 MAMSTRQ6ZN01 415 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 ATP6V0D2Q8N8Y2 350 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 OR8K1Q8NGG5 319 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 PGAP3Q96FM1 320 aaPredicted RBP21.71■■□□□ 1.07
SEC13-217ENST00000482647 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.71■■□□□ 1.07
SEC13-217ENST00000482647 SELENOOQ9BVL4 669 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 PAXBP1Q9Y5B6 917 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 ZNF318Q5VUA4 2279 aa21.71■■□□□ 1.07
SEC13-217ENST00000482647 GOLGA6L7A0A1B0GV03 622 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 TBC1D3BA6NDS4 549 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 SIGLEC16A6NMB1 481 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 GFRA2O00451 464 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 TSPAN3O60637 253 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 ATG13O75143 517 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 FTLP02792 175 aaPredicted RBP21.7■■□□□ 1.06
SEC13-217ENST00000482647 PDGFRAP16234 1089 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 HNRNPH3P31942 346 aaKnown RBP21.7■■□□□ 1.06
SEC13-217ENST00000482647 TNFRSF4P43489 277 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 KDSRQ06136 332 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 FAM133BQ5BKY9 247 aaKnown RBP21.7■■□□□ 1.06
SEC13-217ENST00000482647 DNAJC24Q6P3W2 148 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 SPEM1Q8N4L4 309 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 ZNHIT6Q9NWK9 470 aaKnown RBP21.7■■□□□ 1.06
SEC13-217ENST00000482647 ADAMTS1Q9UHI8 967 aa21.7■■□□□ 1.06
SEC13-217ENST00000482647 ANKRD62A6NC57 917 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 K7EQS6 105 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 LAMTOR5O43504 91 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 RNF40O75150 1001 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 RTN2O75298 545 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 RRM1P23921 792 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 SDC4P31431 198 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 SLC6A4P31645 630 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 DGKGP49619 791 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 CXCR3P49682 368 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 DEUP1Q05D60 604 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 MPP7Q5T2T1 576 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 PIK3R6Q5UE93 754 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 NADSYN1Q6IA69 706 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 TRNP1Q6NT89 227 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 RFWD3Q6PCD5 774 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 Q6ZS52 159 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 PHTF2Q8N3S3 785 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 EMC1Q8N766 993 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 RXFP2Q8WXD0 754 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 EZH1Q92800 747 aaPredicted RBP21.69■■□□□ 1.06
SEC13-217ENST00000482647 P2RY11Q96G91 374 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 CFAP57Q96MR6 1250 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 TBCBQ99426 244 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 DNAJC7Q99615 494 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 SLC2A11Q9BYW1 496 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 IRF2BPLQ9H1B7 796 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 WDCPQ9H6R7 721 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 PIGVQ9NUD9 493 aa21.69■■□□□ 1.06
SEC13-217ENST00000482647 CALCOCO1Q9P1Z2 691 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms