RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 CDK17Q00537 523 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 APBA1Q02410 837 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 PDCLQ13371 301 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 EIF4HQ15056 248 aaKnown RBP11.68□□□□□ -0.54
SORT1-204ENST00000482236 SYCP1Q15431 976 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 STX1AQ16623 288 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 ADGRF1Q5T601 910 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 FYB2Q5VWT5 728 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 RNF43Q68DV7 783 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 RASSF3Q86WH2 238 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 TMEFF1Q8IYR6 380 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 RGL4Q8IZJ4 473 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 AHI1Q8N157 1196 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 SCML4Q8N228 414 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 PHTF2Q8N3S3 785 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 CARNMT1Q8N4J0 409 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 DQX1Q8TE96 717 aaKnown RBP11.68□□□□□ -0.54
SORT1-204ENST00000482236 WFIKKN2Q8TEU8 576 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 ZNF606Q8WXB4 792 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 PPP1R13BQ96KQ4 1090 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 ACOX2Q99424 681 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 EDEM2Q9BV94 578 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 NUSAP1Q9BXS6 441 aaKnown RBP11.68□□□□□ -0.54
SORT1-204ENST00000482236 SLC2A11Q9BYW1 496 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 POPDC2Q9HBU9 364 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 ABCB8Q9NUT2 735 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 STON1Q9Y6Q2 735 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 FANCMQ8IYD8 2048 aa11.68□□□□□ -0.54
SORT1-204ENST00000482236 ATG2BQ96BY7 2078 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 FAM170AA1A519 330 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 DCDC2BA2VCK2 349 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 H0Y626 953 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 NPC1O15118 1278 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 IRAK2O43187 625 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 ACSL4O60488 711 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 GREM1O60565 184 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 ADAM23O75077 832 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 ATP5BP06576 529 aaKnown RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 POLR2EP19388 210 aaKnown RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 DPP6P42658 865 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 GEN1Q17RS7 908 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 PKDCCQ504Y2 493 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 DCAF6Q58WW2 860 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 PMS2CLQ68D20 193 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 MSANTD2Q6P1R3 559 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 RFWD3Q6PCD5 774 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.543e-9■■■■□ 20.7
SORT1-204ENST00000482236 CHST9Q7L1S5 443 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 TAC4Q86UU9 113 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 DEFB119Q8N690 84 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 ATP6V0D2Q8N8Y2 350 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 C1orf131Q8NDD1 294 aaKnown RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 GANCQ8TET4 914 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 DDX1Q92499 740 aaKnown RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 PRCCQ92733 491 aaPredicted RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 ZC3H10Q96K80 434 aaKnown RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 ZSWIM1Q9BR11 485 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 DUSP15Q9H1R2 295 aaPredicted RBP11.67□□□□□ -0.54
SORT1-204ENST00000482236 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 DDIT4Q9NX09 232 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 GGA2Q9UJY4 613 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 NAALADL1Q9UQQ1 740 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 SLC27A6Q9Y2P4 619 aa11.67□□□□□ -0.54
SORT1-204ENST00000482236 A0A0A0MRY4 1105 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 F5H5T6 163 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 GFRA2O00451 464 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 TIMM44O43615 452 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 HSF2BPO75031 334 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 GRAP2O75791 330 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 ZNF806P0C7X5 589 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 PNMA6AP0CW24 399 aaPredicted RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 SLC2A3P11169 496 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 PABPC1P11940 636 aaKnown RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 HNRNPLP14866 589 aaKnown RBP eCLIP11.66□□□□□ -0.544e-17■■■■■ 40.2
SORT1-204ENST00000482236 GABRG2P18507 467 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 NDUFV2P19404 249 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 P2RY2P41231 377 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 GPD2P43304 727 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 YWHAZP63104 245 aaKnown RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 NME3Q13232 169 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 ZNF234Q14588 700 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 MEA1Q16626 185 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 UAP1L1Q3KQV9 507 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 TCP11X2Q5H9J9 407 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 CT47A1Q5JQC4 288 aaPredicted RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 EFHC1Q5JVL4 640 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 RABGAP1LQ5R372 815 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 SYCP2LQ5T4T6 812 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 TAF3Q5VWG9 929 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 DAB2IPQ5VWQ8 1189 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 TCEAL6Q6IPX3 200 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 C11orf57Q6ZUT1 292 aaPredicted RBP11.66□□□□□ -0.54
SORT1-204ENST00000482236 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 LGI2Q8N0V4 545 aa11.66□□□□□ -0.54
SORT1-204ENST00000482236 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms