RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 DLDP09622 509 aaKnown RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 CSH1P0DML2 217 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 CSH2P0DML3 217 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 FERP16591 822 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 PTPN2P17706 415 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 HLA-DPA1P20036 260 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 IDUAP35475 653 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 MSX2P35548 267 aaPredicted RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 NNMTP40261 264 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 HNMTP50135 292 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 CLRN1P58418 232 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 RAB1AP62820 205 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 FOXL1Q12952 345 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 DAG1Q14118 895 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 FGL2Q14314 439 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 COG2Q14746 738 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TBCCQ15814 346 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 PREPLQ4J6C6 727 aaPredicted RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 PABPC1LQ4VXU2 614 aaKnown RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 CTR9Q6PD62 1173 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ZCCHC12Q6PEW1 402 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 RGS9BPQ6ZS82 235 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TMTC3Q6ZXV5 915 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 GPRIN1Q7Z2K8 1008 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 PRPF39Q86UA1 669 aaKnown RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 FUKQ8N0W3 1084 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 D2HGDHQ8N465 521 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 DCBLD1Q8N8Z6 715 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 FBXO18Q8NFZ0 1043 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ZFP28Q8NHY6 868 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 SUN5Q8TC36 379 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ST8SIA2Q92186 375 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TMEM176AQ96HP8 235 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 MRI1Q9BV20 369 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 SSBP3Q9BWW4 388 aaPredicted RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 C1QTNF3Q9BXJ4 246 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ACPTQ9BZG2 426 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TRIM5Q9C035 493 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 VCPKMTQ9H867 229 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TCP11L1Q9NUJ3 509 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ADPRHL2Q9NX46 363 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 FAM153AQ9UHL3 310 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 ZNF215Q9UL58 517 aaPredicted RBP4.41□□□□□ -1.7
VPS41-212ENST00000482217 RNF123Q5XPI4 1314 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 PASKQ96RG2 1323 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 RUSC2Q8N2Y8 1516 aa4.41□□□□□ -1.7
VPS41-212ENST00000482217 TDRD9Q8NDG6 1382 aaKnown RBP4.4□□□□□ -1.7
VPS41-212ENST00000482217 AKNAQ7Z591 1439 aa4.4□□□□□ -1.7
VPS41-212ENST00000482217 PRR5-ARHGAP8B1AHC4 643 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 PATE3B3GLJ2 98 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 H3BNC9 293 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 H3BUI4 141 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 SGK1O00141 431 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 GPR42O15529 346 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 FOXS1O43638 330 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 TSC22D2O75157 780 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 FAM155BO75949 473 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 TMEM63AO94886 807 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 IL18RAPO95256 599 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 AMHP03971 560 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CD1AP06126 327 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 QDPRP09417 244 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CSF1P09603 554 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ACADMP11310 421 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 KELP23276 732 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CHMP24386 653 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ABCD3P28288 659 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 THPOP40225 353 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 RGS2P41220 211 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 MATR3P43243 847 aaKnown RBP eCLIP4.4□□□□□ -1.71
VPS41-212ENST00000482217 PNLIPRP1P54315 467 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 PRKAA2P54646 552 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 HHEXQ03014 270 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 UBE3AQ05086 875 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ZBTB16Q05516 673 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CUL4BQ13620 913 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ELAVL1Q15717 326 aaKnown RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 KYNUQ16719 465 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 ALG11Q2TAA5 492 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 FAM214AQ32MH5 1076 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 BMP2KLQ5H9B9 411 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 DCAF17Q5H9S7 520 aaPredicted RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 TANGO2Q6ICL3 276 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 DRICH1Q6PGQ1 229 aaPredicted RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 OLFM4Q6UX06 510 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 PACS1Q6VY07 963 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 SRBD1Q8N5C6 995 aaKnown RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 TMCO5AQ8N6Q1 288 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 MDGA1Q8NFP4 955 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 NLGN4YQ8NFZ3 816 aaPredicted RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 OR1N1Q8NGS0 311 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CTCFLQ8NI51 663 aaPredicted RBP4.4□□□□□ -1.71
VPS41-212ENST00000482217 SLC35B2Q8TB61 432 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 RUBCNQ92622 972 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CUL5Q93034 780 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 MIEF2Q96C03 454 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 SLC35A4Q96G79 324 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 CALML4Q96GE6 196 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 COG3Q96JB2 828 aa4.4□□□□□ -1.71
VPS41-212ENST00000482217 LOXL4Q96JB6 756 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms