RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 MYL4P12829 197 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 IL4RP24394 825 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 ARL4AP40617 200 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 SLC7A9P82251 487 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 SEMA3BQ13214 749 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 KLF1Q13351 362 aaPredicted RBP12.96□□□□□ -0.33
IFT88-206ENST00000482172 TFDP2Q14188 446 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 CA9Q16790 459 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 PRSS36Q5K4E3 855 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 PDZD4Q76G19 769 aaPredicted RBP12.96□□□□□ -0.33
IFT88-206ENST00000482172 ATP6V0D2Q8N8Y2 350 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 SPATA4Q8NEY3 305 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 ACSF2Q96CM8 615 aaPredicted RBP12.96□□□□□ -0.33
IFT88-206ENST00000482172 BTN2A3PQ96KV6 586 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 RNF157Q96PX1 679 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 KCTD15Q96SI1 283 aaPredicted RBP12.96□□□□□ -0.33
IFT88-206ENST00000482172 KLF16Q9BXK1 252 aaPredicted RBP12.96□□□□□ -0.33
IFT88-206ENST00000482172 CALN1Q9BXU9 219 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 MAK16Q9BXY0 300 aaKnown RBP12.96□□□□□ -0.33
IFT88-206ENST00000482172 RNF38Q9H0F5 515 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 ATXN3LQ9H3M9 355 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 ANLNQ9NQW6 1124 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
IFT88-206ENST00000482172 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.34
IFT88-206ENST00000482172 TRAV19A0A0A6YYK7 116 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 A0A1W2PRU2 124 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 I6L893 689 aaPredicted RBP12.95□□□□□ -0.34
IFT88-206ENST00000482172 KRIT1O00522 736 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 PAGE1O75459 146 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 CD48P09326 243 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 ZFXP17010 805 aaPredicted RBP12.95□□□□□ -0.34
IFT88-206ENST00000482172 HOXB8P17481 243 aaPredicted RBP12.95□□□□□ -0.34
IFT88-206ENST00000482172 HDCP19113 662 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 HYAL1Q12794 435 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 ARHGAP15Q53QZ3 475 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 TCEAL5Q5H9L2 206 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 BBS12Q6ZW61 710 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 MIB1Q86YT6 1006 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 EPAS1Q99814 870 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 FRMD8P1Q9BZ68 369 aaPredicted RBP12.95□□□□□ -0.34
IFT88-206ENST00000482172 HCFC1R1Q9NWW0 138 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 OR12D3Q9UGF7 316 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 OBSL1O75147 1896 aa12.95□□□□□ -0.34
IFT88-206ENST00000482172 DENND4CQ5VZ89 1909 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 EFCAB8A8MWE9 144 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 MOSPD3O75425 235 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 LATS1O95835 1130 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 MBL2P11226 248 aaPredicted RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 KRT10P13645 584 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 CCR2P41597 374 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 HARS2P49590 506 aaKnown RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 CYP4F8P98187 520 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 ADAM15Q13444 863 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 SIX1Q15475 284 aaPredicted RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 CYP1B1Q16678 543 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 PPP6R3Q5H9R7 873 aaPredicted RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 ZNF697Q5TEC3 545 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 TXNDC8Q6A555 127 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 SLC9A4Q6AI14 798 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 ANKRD54Q6NXT1 300 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 MMGT1Q8N4V1 131 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 SHKBP1Q8TBC3 707 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 SMG7Q92540 1137 aaKnown RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 CSPG4P5Q96PW8 444 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 HEMGNQ9BXL5 484 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 DCLK3Q9C098 648 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 TTYH1Q9H313 450 aaPredicted RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 PRDM12Q9H4Q4 367 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 IGFLR1Q9H665 355 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 PIDD1Q9HB75 910 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 TRPC7Q9HCX4 862 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 TMPRSS4Q9NRS4 437 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 SMARCAL1Q9NZC9 954 aa12.94□□□□□ -0.34
IFT88-206ENST00000482172 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
IFT88-206ENST00000482172 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 EEF2KO00418 725 aaKnown RBP12.93□□□□□ -0.34
IFT88-206ENST00000482172 CST8O60676 142 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 STC2O76061 302 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 GLP2RO95838 553 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 TGM2P21980 687 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 WEE1P30291 646 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 HOXC13P31276 330 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 GTF2F1P35269 517 aaKnown RBP eCLIP12.93□□□□□ -0.34
IFT88-206ENST00000482172 SLC11A2P49281 568 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 RBM10P98175 930 aaKnown RBP12.93□□□□□ -0.34
IFT88-206ENST00000482172 MMRN1Q13201 1228 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 DPYSQ14117 519 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 CCNG2Q16589 344 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 GPR158Q5T848 1215 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 MANEALQ5VSG8 457 aa12.93□□□□□ -0.34
IFT88-206ENST00000482172 PRPF38BQ5VTL8 546 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms