RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 S1PR5Q9H228 398 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 TLE6Q9H808 572 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 MANSC1Q9H8J5 431 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 CLIC5Q9NZA1 410 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 KCMF1Q9P0J7 381 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 CPNE7Q9UBL6 633 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 CCDC39Q9UFE4 941 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 AFF4Q9UHB7 1163 aaKnown RBP8.14□□□□□ -1.11
LINC00888-203ENST00000482098 BARX2Q9UMQ3 279 aaPredicted RBP8.14□□□□□ -1.11
LINC00888-203ENST00000482098 SIT1Q9Y3P8 196 aa8.14□□□□□ -1.11
LINC00888-203ENST00000482098 LCE2BO14633 110 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 HNRNPDLO14979 420 aaKnown RBP8.13□□□□□ -1.11
LINC00888-203ENST00000482098 ZNF286BP0CG31 522 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 PDHBP11177 359 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 DNAJB1P25685 340 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 APEX1P27695 318 aaKnown RBP8.13□□□□□ -1.11
LINC00888-203ENST00000482098 GMPRP36959 345 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 MPP1Q00013 466 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 CHRNEQ04844 493 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 FOXO1Q12778 655 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 TROAPQ12815 778 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 NFATC3Q12968 1075 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 KCNC3Q14003 757 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 RAB39AQ14964 217 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 TOMM20Q15388 145 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 DUSP6Q16828 381 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 CCDC96Q2M329 555 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 KHDC1Q4VXA5 237 aaKnown RBP8.13□□□□□ -1.11
LINC00888-203ENST00000482098 CELF3Q5SZQ8 465 aaKnown RBP8.13□□□□□ -1.11
LINC00888-203ENST00000482098 FAM180BQ6P0A1 224 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 SYNE3Q6ZMZ3 975 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 ADGRD2Q7Z7M1 963 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 SPPL2CQ8IUH8 684 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 CCDC105Q8IYK2 499 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 GALNT15Q8N3T1 639 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 BRIX1Q8TDN6 353 aaKnown RBP8.13□□□□□ -1.11
LINC00888-203ENST00000482098 HDAC2Q92769 488 aaKnown RBP8.13□□□□□ -1.11
LINC00888-203ENST00000482098 GTF3C6Q969F1 213 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 ERP27Q96DN0 273 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 IQCDQ96DY2 449 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 RTP3Q9BQQ7 232 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 C16orf70Q9BSU1 422 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 MYO1AQ9UBC5 1043 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 SLC39A10Q9ULF5 831 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 MYH7BA7E2Y1 1941 aa8.13□□□□□ -1.11
LINC00888-203ENST00000482098 USP24Q9UPU5 2620 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 AKR1B10O60218 316 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 PFKFB2O60825 505 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 CUTAO60888 179 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 MPIG6BO95866 241 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 SNHG28P0DPA3 235 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 AOC1P19801 751 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 FUT4P22083 530 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 KIF5BP33176 963 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 SLC16A2P36021 539 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 ITGA8P53708 1063 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 CYP4F8P98187 520 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 GALNT1Q10472 559 aaPredicted RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 BECN1Q14457 450 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 TAF5Q15542 800 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 ASPRV1Q53RT3 343 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 KHDC1LQ5JSQ8 128 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 TAF2Q6P1X5 1199 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 C4orf50Q6ZRC1 276 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 CCDC83Q8IWF9 413 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 ZDHHC14Q8IZN3 488 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 NECAB1Q8N987 351 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 FANCBQ8NB91 859 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 OR10H5Q8NGA6 315 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 SLC30A5Q8TAD4 765 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 VRK1Q99986 396 aaPredicted RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 FAM167BQ9BTA0 163 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 SORBS1Q9BX66 1292 aaKnown RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 FTHL17Q9BXU8 183 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 EIF2AQ9BY44 585 aaKnown RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 MFSD1Q9H3U5 465 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 RNPEPQ9H4A4 650 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 WDCPQ9H6R7 721 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 CNTD2Q9H8S5 307 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 RBM28Q9NW13 759 aaKnown RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 GALNT8Q9NY28 637 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 CALCOCO1Q9P1Z2 691 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 EBF1Q9UH73 591 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 MAD2L2Q9UI95 211 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 TMEM98Q9Y2Y6 226 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 SQORQ9Y6N5 450 aa8.12□□□□□ -1.11
LINC00888-203ENST00000482098 MAP1BP46821 2468 aaKnown RBP8.12□□□□□ -1.11
LINC00888-203ENST00000482098 NLRC5Q86WI3 1866 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 CNTNAP5Q8WYK1 1306 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 CYP26A1O43174 497 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 PLEKHA8P1O95397 391 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 ZGLP1P0C6A0 271 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 GOLGA8HP0CJ92 632 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 STAG3L1P0CL83 205 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 SMIM10L2AP0DMW4 78 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 SMIM10L2BP0DMW5 78 aa8.11□□□□□ -1.11
LINC00888-203ENST00000482098 ELF1P32519 619 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms