RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PCDHB8Q9UN66 801 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 ALPK3Q96L96 1907 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 ZBBXA8MT70 800 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 NT5C1B-RDH14C9J2C7 533 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 HHLA1C9JL84 531 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 GCATO75600 419 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 DGKIO75912 1065 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 LTFP02788 710 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 WDR5P61964 334 aaKnown RBP16.31■□□□□ 0.2
RXRA-202ENST00000481739 DEFB103AP81534 67 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 ARL13BQ3SXY8 428 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 SPOUT1Q5T280 376 aaKnown RBP16.31■□□□□ 0.2
RXRA-202ENST00000481739 OTUD1Q5VV17 481 aaPredicted RBP16.31■□□□□ 0.2
RXRA-202ENST00000481739 ANKRD22Q5VYY1 191 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 PM20D1Q6GTS8 502 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 MICALCLQ6ZW33 695 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
RXRA-202ENST00000481739 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 BADQ92934 168 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 TOP1MTQ969P6 601 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 LRRC39Q96DD0 335 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 CCT8L2Q96SF2 557 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 PKMYT1Q99640 499 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 RTP3Q9BQQ7 232 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
RXRA-202ENST00000481739 ATXN2Q99700 1313 aaKnown RBP16.3■□□□□ 0.2
RXRA-202ENST00000481739 C5orf60A6NFR6 353 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 STK10O94804 968 aaKnown RBP16.3■□□□□ 0.2
RXRA-202ENST00000481739 TMEM63AO94886 807 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 RBL1P28749 1068 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 PBX3P40426 434 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 HCAR3P49019 387 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 ATXN1P54253 815 aaKnown RBP16.3■□□□□ 0.2
RXRA-202ENST00000481739 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.2
RXRA-202ENST00000481739 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 MCUQ8NE86 351 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 OLFM3Q96PB7 478 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 TMEM175Q9BSA9 504 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 C10orf88Q9H8K7 445 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 PPANQ9NQ55 473 aaKnown RBP16.3■□□□□ 0.2
RXRA-202ENST00000481739 RAB6BQ9NRW1 208 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 NAALADL1Q9UQQ1 740 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.3■□□□□ 0.2
RXRA-202ENST00000481739 TSC2P49815 1807 aa16.3■□□□□ 0.2
RXRA-202ENST00000481739 GALTP07902 379 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 CCT5P48643 541 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 NDUFV1P49821 464 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 YWHAHQ04917 246 aaPredicted RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 FPGSQ05932 587 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 FASTKD3Q14CZ7 662 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 ZNF473Q8WTR7 871 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 TFB1MQ8WVM0 346 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 ATXN2LQ8WWM7 1075 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 CHMP6Q96FZ7 201 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 ACSS3Q9H6R3 686 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 DTLQ9NZJ0 730 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 PSMC3IPQ9P2W1 217 aaPredicted RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 RSPH14Q9UHP6 348 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 YJEFN3A6XGL0 299 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 E7ENQ6 273 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 BAIAP3O94812 1187 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 FGBP02675 491 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 GOT1P17174 413 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 TPSB2P20231 275 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 ADRA1BP35368 520 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 ALDH7A1P49419 539 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 SLC18A1P54219 525 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 GEMIN4P57678 1058 aaKnown RBP16.29■□□□□ 0.2
RXRA-202ENST00000481739 CDK16Q00536 496 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 PDK1Q15118 436 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 TPSAB1Q15661 275 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 FAM171A1Q5VUB5 890 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 PALM2Q8IXS6 379 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 CNPY4Q8N129 248 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 SLC7A14Q8TBB6 771 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 MAML1Q92585 1016 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 BRD8Q9H0E9 1235 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 ETNK2Q9NVF9 386 aa16.29■□□□□ 0.2
RXRA-202ENST00000481739 GOLGA8MH3BSY2 632 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 PPP1R12AO14974 1030 aaPredicted RBP16.28■□□□□ 0.2
RXRA-202ENST00000481739 NCAM2O15394 837 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 FYNP06241 537 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 GSTA2P09210 222 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 NCAM1P13591 858 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 FDFT1P37268 417 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 GBE1Q04446 702 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 PAFAH1B3Q15102 231 aaKnown RBP16.28■□□□□ 0.2
RXRA-202ENST00000481739 FNBP1LQ5T0N5 605 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 SYPL2Q5VXT5 272 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 KCNT2Q6UVM3 1135 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 ARHGEF18Q6ZSZ5 1173 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 CCDC13Q8IYE1 715 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 FBXO36Q8NEA4 188 aa16.28■□□□□ 0.2
RXRA-202ENST00000481739 KCNK16Q96T55 309 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms