RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PNKPQ96T60 521 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PCDH9Q9HC56 1237 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 TUBE1Q9UJT0 475 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 TARS2Q9BW92 718 aaKnown RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SAE1Q9UBE0 346 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SERPINF2P08697 491 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 UBTFL6P0CB48 400 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 RARGP13631 454 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 AVPR1AP37288 418 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 S100A13Q99584 98 aa9.78□□□□□ -0.84
VEGFA-212ENST00000480614 MRPL39Q9NYK5 338 aaKnown RBP9.78□□□□□ -0.84
VEGFA-212ENST00000480614 PRR23AA6NEV1 266 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 NKRFO15226 690 aaKnown RBP eCLIP9.77□□□□□ -0.842e-6■□□□□ 8.4
VEGFA-212ENST00000480614 UPP2O95045 317 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 ABCB1P08183 1280 aaPredicted RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 SUPT20HL2P0C7V6 817 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 HOXB6P17509 224 aaKnown RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 PAGE2BQ5JRK9 111 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 FAM120BQ96EK7 910 aaKnown RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 PHTF1Q9UMS5 762 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 B3GAT3O94766 335 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 RFX3P48380 749 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 MSLNQ13421 630 aaPredicted RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 C2CD6Q53TS8 623 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 SAMD4BQ5PRF9 694 aaKnown RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 WDR49Q8IV35 697 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 MIER2Q8N344 545 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 CNTNAP5Q8WYK1 1306 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 MYOZ2Q9NPC6 264 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 PNMA8BQ9ULN7 279 aaPredicted RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 SNX8Q9Y5X2 465 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 KPNA4O00629 521 aaPredicted RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 CYP2A6P11509 494 aaPredicted RBP9.77□□□□□ -0.84
VEGFA-212ENST00000480614 CKBP12277 381 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 SLC25A24Q6NUK1 477 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 MACC1Q6ZN28 852 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 GPAMQ9HCL2 828 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 ENTPD4Q9Y227 616 aa9.77□□□□□ -0.84
VEGFA-212ENST00000480614 RPL3P39023 403 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 TAF13Q15543 124 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 MPZL3Q6UWV2 235 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 RINLQ6ZS11 566 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 MED8Q96G25 268 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 TRIT1Q9H3H1 467 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF70Q9UC06 446 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ATG7O95352 703 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 FASP25445 335 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 DNAJB2P25686 324 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 PTPAQ15257 358 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 COMMD2Q86X83 199 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ABCA1O95477 2261 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 MYL12BO14950 172 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 POU1F1P28069 291 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 POLR2LP62875 67 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 KIAA0408Q6ZU52 694 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 VN1R5Q7Z5H4 357 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 COQ7Q99807 217 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 SIK3Q9Y2K2 1263 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 NUP205Q92621 2012 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 SKAP2O75563 359 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 MTA2O94776 668 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ZBTB7AO95365 584 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 FOXO4P98177 505 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 PAFAH2Q99487 392 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 CAPN10Q9HC96 672 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 LOC100653049A0A140TA62 436 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 RCVRNP35243 200 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 NFIL3Q16649 462 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ZCWPW1Q9H0M4 648 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 EVPLQ92817 2033 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 GPR15P49685 360 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 BST2Q10589 180 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 SGCGQ13326 291 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 PTGES3Q15185 160 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 GRTP1Q5TC63 336 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 WDR93Q6P2C0 686 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 TRHDEQ9UKU6 1024 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 RUVBL2Q9Y230 463 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 USP31Q70CQ4 1352 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 BAZ2AQ9UIF9 1905 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 XYLBO75191 536 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 RECQL5O94762 991 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 CREMQ03060 361 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 TMEM62Q0P6H9 643 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 WASHC2DQ5SRD0 308 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 KYAT3Q6YP21 454 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 ZNF513Q8N8E2 541 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 OR56A4Q8NGH8 313 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 RORBQ92753 470 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 PANX3Q96QZ0 392 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 AP4E1Q9UPM8 1137 aa9.77□□□□□ -0.85
VEGFA-212ENST00000480614 TNPO3Q9Y5L0 923 aaKnown RBP9.77□□□□□ -0.85
VEGFA-212ENST00000480614 E2F8A0AVK6 867 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 RHOCP08134 193 aa9.76□□□□□ -0.85
VEGFA-212ENST00000480614 PGAM1P18669 254 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms