RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 NUDT5Q9UKK9 219 aa13.05□□□□□ -0.32
SIK3-209ENST00000480222 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 PI4K2BG5E9Z4 385 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 KRIT1O00522 736 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 ZNF197O14709 1029 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 TBX18O95935 607 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 RHOP08100 348 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 MYL4P12829 197 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 L1CAMP32004 1257 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 TFDP2Q14188 446 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 CA9Q16790 459 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 ARHGAP15Q53QZ3 475 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 ZC3H12AQ5D1E8 599 aaKnown RBP13.04□□□□□ -0.32
SIK3-209ENST00000480222 PPP6R3Q5H9R7 873 aaPredicted RBP13.04□□□□□ -0.32
SIK3-209ENST00000480222 UNC45BQ8IWX7 931 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 SPATA4Q8NEY3 305 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.04□□□□□ -0.32
SIK3-209ENST00000480222 ZNF707Q96C28 371 aaPredicted RBP13.04□□□□□ -0.32
SIK3-209ENST00000480222 BTN2A3PQ96KV6 586 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 KCTD15Q96SI1 283 aaPredicted RBP13.04□□□□□ -0.32
SIK3-209ENST00000480222 FRMD8P1Q9BZ68 369 aaPredicted RBP13.04□□□□□ -0.32
SIK3-209ENST00000480222 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 HOMER3Q9NSC5 361 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
SIK3-209ENST00000480222 CCDC195A0A1B0GUA6 201 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 A0A1W2PRU2 124 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 C2orf78A6NCI8 922 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 RFXAPO00287 272 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 PAGE1O75459 146 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 LATS1O95835 1130 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 CD48P09326 243 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
SIK3-209ENST00000480222 HCAR3P49019 387 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 TPI1P60174 286 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 SLC7A9P82251 487 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 CYP4F8P98187 520 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 HYAL1Q12794 435 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 ANKRD20A8PQ5CZ79 823 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 PRSS36Q5K4E3 855 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 AADACL2Q6P093 401 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 RFX8Q6ZV50 586 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 BBS12Q6ZW61 710 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIK3-209ENST00000480222 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
SIK3-209ENST00000480222 TTC13Q8NBP0 860 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 VN1R2Q8NFZ6 395 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
SIK3-209ENST00000480222 AZIN2Q96A70 460 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 C1orf74Q96LT6 269 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 CSPG4P5Q96PW8 444 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 RNF157Q96PX1 679 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 MAK16Q9BXY0 300 aaKnown RBP13.03□□□□□ -0.32
SIK3-209ENST00000480222 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 TRPC7Q9HCX4 862 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 HCFC1R1Q9NWW0 138 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 SMARCAL1Q9NZC9 954 aa13.03□□□□□ -0.32
SIK3-209ENST00000480222 DNMT3BQ9UBC3 853 aaKnown RBP13.03□□□□□ -0.32
SIK3-209ENST00000480222 NUP210Q8TEM1 1887 aaPredicted RBP13.03□□□□□ -0.32
SIK3-209ENST00000480222 VCANP13611 3396 aa13.02□□□□□ -0.32
SIK3-209ENST00000480222 SPTBN5Q9NRC6 3674 aaKnown RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 EFCAB8A8MWE9 144 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 I6L893 689 aaPredicted RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 EEF2KO00418 725 aaKnown RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 APOL1O14791 398 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 FGF10O15520 208 aaPredicted RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 PHF2O75151 1096 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 CKMP06732 381 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 HOXB8P17481 243 aaPredicted RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 POU3F3P20264 500 aaPredicted RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 TGM2P21980 687 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 HOXC13P31276 330 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 CYP1B1Q16678 543 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 MANEALQ5VSG8 457 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 KAZNQ674X7 775 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 SLC9A4Q6AI14 798 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 RFX6Q8HWS3 928 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
SIK3-209ENST00000480222 DCLK3Q9C098 648 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 OR12D3Q9UGF7 316 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 ARHGAP26Q9UNA1 814 aa13.02□□□□□ -0.33
SIK3-209ENST00000480222 C2orf16Q68DN1 1984 aa13.01□□□□□ -0.33
SIK3-209ENST00000480222 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
SIK3-209ENST00000480222 APOC4-APOC2K7ER74 178 aa13.01□□□□□ -0.33
SIK3-209ENST00000480222 CREB3O43889 395 aa13.01□□□□□ -0.33
SIK3-209ENST00000480222 CST8O60676 142 aa13.01□□□□□ -0.33
SIK3-209ENST00000480222 STC2O76061 302 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms