RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 RAPGEF5Q92565 580 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 C1orf74Q96LT6 269 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 ZNF670Q9BS34 389 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 ZWILCHQ9H900 591 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 L2HGDHQ9H9P8 463 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 PIDD1Q9HB75 910 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 PCDH18Q9HCL0 1135 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 STOML2Q9UJZ1 356 aa17.47■□□□□ 0.39
SCAMP3-207ENST00000480219 SYNJ2BP-COX16A0A087WUM0 186 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 SPDYE4A6NLX3 237 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 STC2O76061 302 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 KRT1P04264 644 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 IL4RP24394 825 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 CDKN2BP42772 138 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 HCAR3P49019 387 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 DLX2Q07687 328 aaPredicted RBP17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 DPYSL3Q14195 570 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 CA9Q16790 459 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 SMTNL2Q2TAL5 461 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 EFHC2Q5JST6 749 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 STXBP5Q5T5C0 1151 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 GPR158Q5T848 1215 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 MANEALQ5VSG8 457 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 POTEHQ6S545 545 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 MAP7D3Q8IWC1 876 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 CMTM8Q8IZV2 173 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 ARL14EPQ8N8R7 260 aaPredicted RBP17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 MAB21L3Q8N8X9 362 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 ATP6V0D2Q8N8Y2 350 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 BTN2A3PQ96KV6 586 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 PRDM16Q9HAZ2 1276 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 COX16Q9P0S2 106 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 MRPS23Q9Y3D9 190 aaKnown RBP17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 MRFAP1Q9Y605 127 aa17.46■□□□□ 0.39
SCAMP3-207ENST00000480219 DOCK6Q96HP0 2047 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 HELZP42694 1942 aaKnown RBP17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 PAGE1O75459 146 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 APOEP02649 317 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 MBL2P11226 248 aaPredicted RBP17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 GJA1P17302 382 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 CEBPBP17676 345 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 HOXC13P31276 330 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 CXCR5P32302 372 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 MLLT6P55198 1093 aaPredicted RBP17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 ZXDBP98169 803 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 KLF1Q13351 362 aaPredicted RBP17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 CLUL1Q15846 466 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 MFSD7Q6UXD7 560 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 SPOCD1Q6ZMY3 1216 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 ANKS1BQ7Z6G8 1248 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 FAM217AQ8IXS0 508 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 ZNF683Q8IZ20 524 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 ITFG1Q8TB96 612 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 HSPH1Q92598 858 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 KCTD15Q96SI1 283 aaPredicted RBP17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 CYP2S1Q96SQ9 504 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 PSMB7Q99436 277 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 NACA2Q9H009 215 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 TRPC7Q9HCX4 862 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 GPATCH2LQ9NWQ4 482 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 NEU3Q9UQ49 428 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 CPQQ9Y646 472 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 DENND4AQ7Z401 1863 aa17.45■□□□□ 0.38
SCAMP3-207ENST00000480219 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 IGLV3-10A0A075B6K4 115 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 hCG_1818297A0A087WSY0 165 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 GFRA2O00451 464 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 SRGAP2O75044 1071 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 URI1O94763 535 aaPredicted RBP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 CD48P09326 243 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 FSHRP23945 695 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 KCNQ1P51787 676 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 CDH6P55285 790 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 C5orf22Q49AR2 442 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 TFDP3Q5H9I0 405 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 HABP4Q5JVS0 413 aaKnown RBP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 SEL1L2Q5TEA6 688 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 Q6ZNB5 142 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 HTR3DQ70Z44 454 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 DDX42Q86XP3 938 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 MICALL1Q8N3F8 863 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 KCTD6Q8NC69 237 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 SMRP1Q8NCR6 262 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 ACSF2Q96CM8 615 aaPredicted RBP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 PRMT1Q99873 361 aaKnown RBP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 OSBPL8Q9BZF1 889 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 DCLK3Q9C098 648 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 DHX35Q9H5Z1 703 aaKnown RBP17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 TRPV4Q9HBA0 871 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 TMPRSS4Q9NRS4 437 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 CLDND1Q9NY35 253 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 GDE1Q9NZC3 331 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 SLC12A6Q9UHW9 1150 aa17.44■□□□□ 0.38
SCAMP3-207ENST00000480219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.43■□□□□ 0.38
SCAMP3-207ENST00000480219 LRRD1A4D1F6 860 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms