RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 RAD17O75943 681 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 GALK1P51570 392 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 SH3BGRP55822 239 aaPredicted RBP21.34■■□□□ 1.01
COL13A1-208ENST00000479733 HPCAP84074 193 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 XKR3Q5GH77 459 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 BRSK2Q8IWQ3 736 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 RXFP2Q8WXD0 754 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 SLC7A3Q8WY07 619 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 TWNKQ96RR1 684 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 NGRNQ9NPE2 291 aaKnown RBP21.34■■□□□ 1.01
COL13A1-208ENST00000479733 MKS1Q9NXB0 559 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 ARHGAP26Q9UNA1 814 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 AP4B1Q9Y6B7 739 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 YDJCA8MPS7 323 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 M0QYV0 167 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 PLIN3O60664 434 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 DKC1O60832 514 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL13A1-208ENST00000479733 OGFRL1Q5TC84 451 aaPredicted RBP21.34■■□□□ 1.01
COL13A1-208ENST00000479733 TRNP1Q6NT89 227 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 WDR49Q8IV35 697 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 RDM1Q8NG50 284 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 BTBD9Q96Q07 612 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 MRPL1Q9BYD6 325 aaKnown RBP21.34■■□□□ 1.01
COL13A1-208ENST00000479733 PSAT1Q9Y617 370 aa21.34■■□□□ 1.01
COL13A1-208ENST00000479733 SERPINE1P05121 402 aa21.33■■□□□ 1.01
COL13A1-208ENST00000479733 ATP5BP06576 529 aaKnown RBP21.33■■□□□ 1.01
COL13A1-208ENST00000479733 NAMPTP43490 491 aa21.33■■□□□ 1.01
COL13A1-208ENST00000479733 NUDT2P50583 147 aa21.33■■□□□ 1.01
COL13A1-208ENST00000479733 FKBP1AP62942 108 aaKnown RBP21.33■■□□□ 1.01
COL13A1-208ENST00000479733 PRPF31Q8WWY3 499 aaKnown RBP21.33■■□□□ 1.01
COL13A1-208ENST00000479733 LENG8Q96PV6 779 aaPredicted RBP21.33■■□□□ 1.01
COL13A1-208ENST00000479733 TMEM216Q9P0N5 145 aa21.33■■□□□ 1.01
COL13A1-208ENST00000479733 A0A1B0GTW7 788 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 MTTPP55157 894 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 PKNOX1P55347 436 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 COG7P83436 770 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 OR6B2Q6IFH4 312 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 ZNF534Q76KX8 674 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 NETO2Q8NC67 525 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 PGLYRP2Q96PD5 576 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 RNF146Q9NTX7 359 aa21.33■■□□□ 1
COL13A1-208ENST00000479733 HEMK1Q9Y5R4 338 aaPredicted RBP21.33■■□□□ 1
COL13A1-208ENST00000479733 ASNSP08243 561 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CA9Q16790 459 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 FAM47CQ5HY64 1035 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 PPM1LQ5SGD2 360 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 SH2D4BQ5SQS7 431 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 ABHD15Q6UXT9 468 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 NCAPG2Q86XI2 1143 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 USP13Q92995 863 aaPredicted RBP21.32■■□□□ 1
COL13A1-208ENST00000479733 COG4Q9H9E3 785 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 H3BSA7 217 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 NEMP1O14524 444 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 APOL1O14791 398 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CASQ2O14958 399 aaPredicted RBP21.32■■□□□ 1
COL13A1-208ENST00000479733 MAGEB3O15480 346 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 RALBP11234 206 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 SESN2P58004 480 aaPredicted RBP21.32■■□□□ 1
COL13A1-208ENST00000479733 MYBPC1Q00872 1141 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 PDK1Q15118 436 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 SLC9B1Q4ZJI4 515 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CES3Q6UWW8 571 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CYP4V2Q6ZWL3 525 aaPredicted RBP21.32■■□□□ 1
COL13A1-208ENST00000479733 MARVELD2Q8N4S9 558 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 PQLC3Q8N755 202 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 ADAM32Q8TC27 787 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 MAGEB5Q9BZ81 275 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 XPNPEP3Q9NQH7 507 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 PSMD13Q9UNM6 376 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 A0A0J9YVX5 310 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 MMP10P09238 476 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CDK4P11802 303 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 IL4RP24394 825 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 SERPINB9P50453 376 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 HDAC4P56524 1084 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CAPSQ13938 189 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 ACAP1Q15027 740 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CYTH1Q15438 398 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 TMEM259Q4ZIN3 620 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 PCDH19Q8TAB3 1148 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 ATP2A3Q93084 1043 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 KCNK16Q96T55 309 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 SH3BP1Q9Y3L3 701 aa21.32■■□□□ 1
COL13A1-208ENST00000479733 CNTNAP1P78357 1384 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 MED7O43513 233 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 MICAL2O94851 1124 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 NELFEP18615 380 aaKnown RBP21.31■■□□□ 1
COL13A1-208ENST00000479733 ABCE1P61221 599 aaKnown RBP21.31■■□□□ 1
COL13A1-208ENST00000479733 KLF10Q13118 480 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 ZNF781Q8N8C0 355 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 CDRT15Q96T59 188 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 XYLT2Q9H1B5 865 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 Q9H521 79 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 GNEQ9Y223 722 aaKnown RBP21.31■■□□□ 1
COL13A1-208ENST00000479733 PCDHA11Q9Y5I1 949 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 TCN1P20061 433 aaPredicted RBP21.31■■□□□ 1
COL13A1-208ENST00000479733 SP2Q02086 613 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 CMC1Q7Z7K0 106 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 AMIGO2Q86SJ2 522 aa21.31■■□□□ 1
COL13A1-208ENST00000479733 MAPK15Q8TD08 544 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms