RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 ENGP17813 658 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 SPINK2P20155 84 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 ZNF33AQ06730 810 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 SYT12Q8IV01 421 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 CPXM2Q8N436 756 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 TRIML1Q8N9V2 468 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 KCNV2Q8TDN2 545 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 KCTD13Q8WZ19 329 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 MED15Q96RN5 788 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 UBE2TQ9NPD8 197 aaPredicted RBP18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 STIM2Q9P246 746 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 THAP10Q9P2Z0 257 aaPredicted RBP18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 TJP2Q9UDY2 1190 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 PILRBQ9UKJ0 227 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 SLC27A6Q9Y2P4 619 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 TMEM131Q92545 1883 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 KCNJ18B7U540 433 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 AP5Z1O43299 807 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 LTFP02788 710 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 HLA-FP30511 346 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 SLC6A4P31645 630 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 HARS2P49590 506 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 ZNF132P52740 706 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 CNGA2Q16280 664 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 ARHGAP44Q17R89 818 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 SH3PXD2AQ5TCZ1 1133 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 FAM124AQ86V42 546 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 RGL4Q8IZJ4 473 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 DEFB124Q8NES8 71 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 NUSAP1Q9BXS6 441 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 MTG2Q9H4K7 406 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 CNGB3Q9NQW8 809 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 ABCC13Q9NSE7 274 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 OLA1Q9NTK5 396 aaKnown RBP18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 ABCB8Q9NUT2 735 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 ELOVL2Q9NXB9 296 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 CYTH4Q9UIA0 394 aa18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 AJAP1Q9UKB5 411 aaPredicted RBP18.13■□□□□ 0.49
ECHDC1-216ENST00000479525 ZBTB24O43167 697 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 TBL1XO60907 577 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 LETM1O95202 739 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 MOCS2O96007 188 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 EPHX1P07099 455 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 SLC9A1P19634 815 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 HSP90AA4PQ58FG1 418 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 NADSYN1Q6IA69 706 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 SCUBE3Q8IX30 993 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 FAM217AQ8IXS0 508 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 ELOA2Q8IYF1 753 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 FAM149B1Q96BN6 582 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 GTPBP4Q9BZE4 634 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 FAM124BQ9H5Z6 455 aaPredicted RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 NAALADL1Q9UQQ1 740 aa18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 HBS1LQ9Y450 684 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 MAP1BP46821 2468 aaKnown RBP18.12■□□□□ 0.49
ECHDC1-216ENST00000479525 FRYQ5TBA9 3013 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 NDUFS2O75306 463 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 KRT37O76014 449 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 FYNP06241 537 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 NCAM1P13591 858 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 CD70P32970 193 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 USP8P40818 1118 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 PPP1R2P41236 205 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 PITX1P78337 314 aaPredicted RBP18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 ZNF252P-AS1Q0IIN9 211 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 CETN1Q12798 172 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 BYSLQ13895 437 aaKnown RBP18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 STARD3Q14849 445 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 MPPE1Q53F39 396 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 DAB2IPQ5VWQ8 1189 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 CHST9Q7L1S5 443 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 UCMAQ8WVF2 138 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 DDX1Q92499 740 aaKnown RBP18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 TMA16Q96EY4 203 aaKnown RBP18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 GPR174Q9BXC1 333 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 PRDM16Q9HAZ2 1276 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 XPO7Q9UIA9 1087 aaKnown RBP18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 KIAA1257Q9ULG3 409 aa18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 TPRP12270 2363 aaKnown RBP18.11■□□□□ 0.49
ECHDC1-216ENST00000479525 PMM2O15305 246 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 PNMA6AP0CW24 399 aaPredicted RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 COPAP53621 1224 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 TBX4P57082 545 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 ARID5AQ03989 594 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 FOXC1Q12948 553 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 FNDC3BQ53EP0 1204 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 FAM133BQ5BKY9 247 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 MSANTD2Q6P1R3 559 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 SERPINA13PQ6UXR4 307 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 SLC36A4Q6YBV0 504 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 TMPRSS6Q8IU80 811 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 PASD1Q8IV76 773 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 DQX1Q8TE96 717 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 TOE1Q96GM8 510 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 PRICKLE1Q96MT3 831 aaPredicted RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 EVLQ9UI08 416 aaPredicted RBP18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 PLXNA2O75051 1894 aa18.1■□□□□ 0.49
ECHDC1-216ENST00000479525 E5RJQ4 531 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms