RNA–Protein interactions for RNA: ENST00000478798.1

BCCIP-205, Transcript of BRCA2 and CDKN1A interacting protein, human

TSL 2

Gene BCCIP, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCCIP-205	ENST00000478798		Q6ZNX1	250 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	USP51	Q70EK9	711 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	RTL10	Q7L3V2	364 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	GGN	Q86UU5	652 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	DZIP1	Q86YF9	867 aa	Known RBP	4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	VRK3	Q8IV63	474 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	CEP57L1	Q8IYX8	460 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	LSMEM1	Q8N8F7	131 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	BRSK1	Q8TDC3	778 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	NEU4	Q8WWR8	484 aa	Predicted RBP	4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	USP6NL	Q92738	828 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	PPP2R3C	Q969Q6	453 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	PGBD1	Q96JS3	809 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	COQ10A	Q96MF6	247 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	SLX1A	Q9BQ83	275 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	MAGEB5	Q9BZ81	275 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	UNC45A	Q9H3U1	944 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	ATP8A2	Q9NTI2	1148 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	IRAK4	Q9NWZ3	460 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	SYBU	Q9NX95	663 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	DKK3	Q9UBP4	350 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	DKK4	Q9UBT3	224 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	CDC23	Q9UJX2	597 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	CFAP45	Q9UL16	551 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	CAPN11	Q9UMQ6	739 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	ITM2B	Q9Y287	266 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	MAN2B2	Q9Y2E5	1009 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	RRP7A	Q9Y3A4	280 aa	Known RBP	4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	SNX14	Q9Y5W7	946 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	RNF17	Q9BXT8	1623 aa	Known RBP	4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	MAST3	O60307	1309 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	ADGRA2	Q96PE1	1338 aa		4.57	□□□□□ -1.68
BCCIP-205	ENST00000478798	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ANKRD18B	A2A2Z9	1011 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TSPY2	A6NKD2	308 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	C2orf81	A6NN90	581 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	BOLA2-SMG1P6	H3BVE0	249 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	INO80B-WBP1	J3KQ70	363 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	CD3EAP	O15446	510 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	RGS10	O43665	173 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	B3GALNT1	O75752	331 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	NDST3	O95803	873 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	CHRM2	P08172	466 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TSPY3	P0CV98	308 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TSPY8	P0CW00	308 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	SKIL	P12757	684 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	KRT13	P13646	458 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ATP6V1B1	P15313	513 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	RPS2	P15880	293 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	PPM1A	P35813	382 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	FOLR3	P41439	243 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	MAGEA8	P43361	318 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	HSPA7	P48741	367 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	HSD17B7	P56937	341 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TSPY1	Q01534	308 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	CCDC15	Q0P6D6	951 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	KCNAB1	Q14722	419 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TXNRD1	Q16881	649 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TEDDM1	Q5T9Z0	273 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	INTS11	Q5TA45	600 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TMCO3	Q6UWJ1	677 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	RUFY3	Q7L099	469 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	FASTKD5	Q7L8L6	764 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ZNF627	Q7L945	461 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	KRT28	Q7Z3Y7	464 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	MAVS	Q7Z434	540 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	BEND2	Q8NDZ0	799 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TDRD7	Q8NHU6	1098 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	OSCP1	Q8WVF1	389 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	LINC00476	Q8WZB0	136 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	CAVIN3	Q969G5	261 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	SNX21	Q969T3	373 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ZNF566	Q969W8	418 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	JAKMIP2	Q96AA8	810 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	FKBP10	Q96AY3	582 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	FBXL20	Q96IG2	436 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ALG8	Q9BVK2	526 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	EIF2A	Q9BY44	585 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TSPYL1	Q9H0U9	437 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	FAM83D	Q9H4H8	585 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	GBA2	Q9HCG7	927 aa	Predicted RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ZCCHC17	Q9NP64	241 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	ALG13	Q9NP73	1137 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	TRMT13	Q9NUP7	481 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	EXOC1	Q9NV70	894 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	HERC5	Q9UII4	1024 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	BLOC1S6	Q9UL45	172 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	AGTPBP1	Q9UPW5	1226 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	KNSTRN	Q9Y448	316 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	LRRFIP2	Q9Y608	721 aa	Known RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	RERE	Q9P2R6	1566 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	DIP2C	Q9Y2E4	1556 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	SETBP1	Q9Y6X0	1596 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	CARMIL1	Q5VZK9	1371 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	LRRC7	Q96NW7	1537 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	COL4A3	Q01955	1670 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798	SHANK2	Q9UPX8	1470 aa		4.56	□□□□□ -1.68
BCCIP-205	ENST00000478798		A0A1B0GVC2	190 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms