RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 RGL4Q8IZJ4 473 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 SCML4Q8N228 414 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 TOE1Q96GM8 510 aaKnown RBP13.59□□□□□ -0.23
ABCF3-212ENST00000478288 IRX2Q9BZI1 471 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-212ENST00000478288 SLC6A17Q9H1V8 727 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 CD93Q9NPY3 652 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 FSCN3Q9NQT6 498 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 RMND1Q9NWS8 449 aa13.59□□□□□ -0.23
ABCF3-212ENST00000478288 SMG1Q96Q15 3661 aaKnown RBP13.59□□□□□ -0.23
ABCF3-212ENST00000478288 LOC400499M0QZD8 3231 aa13.58□□□□□ -0.23
ABCF3-212ENST00000478288 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 SLC12A8A0AV02 714 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 HYAL3O43820 417 aaPredicted RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 ZNF883P0CG24 379 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 NCAM1P13591 858 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 HOXD9P28356 352 aaPredicted RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 HARS2P49590 506 aaKnown RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 TPMTP51580 245 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 COPAP53621 1224 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 YWHAEP62258 255 aaKnown RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 BST2Q10589 180 aaKnown RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 GRIK2Q13002 908 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 CUL2Q13617 745 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 ZNF234Q14588 700 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 CBWD6Q4V339 395 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 MPPE1Q53F39 396 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 CBWD3Q5JTY5 395 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 CBWD5Q5RIA9 395 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 RAB44Q7Z6P3 723 aaPredicted RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 TMPRSS6Q8IU80 811 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 WFIKKN2Q8TEU8 576 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 DDI1Q8WTU0 396 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 KCTD13Q8WZ19 329 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 PRCCQ92733 491 aaPredicted RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 SIPA1Q96FS4 1042 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 NUP58Q9BVL2 599 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
ABCF3-212ENST00000478288 GOLPH3LQ9H4A5 285 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 FBRSQ9HAH7 460 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 LRRC4Q9HBW1 653 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 KIAA1257Q9ULG3 409 aa13.58□□□□□ -0.24
ABCF3-212ENST00000478288 METTL12A8MUP2 240 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 MEI4A8MW99 385 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 HMBSP08397 361 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 SETSIPP0DME0 302 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 TBXAS1P24557 533 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 FKBP3Q00688 224 aaKnown RBP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 CAMK2GQ13555 558 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 GOLGA7BQ2TAP0 167 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 TMEM215Q68D42 235 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 IL27RAQ6UWB1 636 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 GLRX5Q86SX6 157 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 NAXDQ8IW45 347 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 OR2T3Q8NH03 318 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 ZCCHC14Q8WYQ9 949 aaKnown RBP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 TATDN2Q93075 761 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
ABCF3-212ENST00000478288 GSDMAQ96QA5 445 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 GPR174Q9BXC1 333 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 ULBP1Q9BZM6 244 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 CIPCQ9C0C6 399 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 CNGB3Q9NQW8 809 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 ABCC13Q9NSE7 274 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 KLK13Q9UKR3 277 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 CLEC4EQ9ULY5 219 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 PTPRBP23467 1997 aa13.57□□□□□ -0.24
ABCF3-212ENST00000478288 KCNJ18B7U540 433 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 O00370 1275 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 PMM2O15305 246 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 CER1O95813 267 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 EPHX1P07099 455 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 VDRP11473 427 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 PRKCHP24723 683 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 HLA-FP30511 346 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 FAM193AP78312 1265 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 ZBTB16Q05516 673 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 LRRC63Q05C16 580 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 ADIGQ0VDE8 80 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 TRIP6Q15654 476 aaKnown RBP13.56□□□□□ -0.24
ABCF3-212ENST00000478288 PKDCCQ504Y2 493 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 DCAF17Q5H9S7 520 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-212ENST00000478288 MPP7Q5T2T1 576 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 ADGRF1Q5T601 910 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 ZNF658Q5TYW1 1059 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-212ENST00000478288 MSANTD2Q6P1R3 559 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 SERPINA13PQ6UXR4 307 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 KIAA0907Q7Z7F0 614 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-212ENST00000478288 FMNL3Q8IVF7 1028 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 UBR7Q8N806 425 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 ZNF557Q8N988 423 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-212ENST00000478288 OR2I1PQ8NGU4 316 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 C1orf216Q8TAB5 229 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
ABCF3-212ENST00000478288 RNF139Q8WU17 664 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms