RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 LRRC27Q9C0I9 530 aa21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 NRSN2Q9GZP1 204 aa21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 BTBD1Q9H0C5 482 aa21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 FBRSQ9HAH7 460 aa21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 KBTBD4Q9NVX7 518 aa21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 CLIC5Q9NZA1 410 aa21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 AGO1Q9UL18 857 aaKnown RBP21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 TP53BP1Q12888 1972 aaPredicted RBP21.24■□□□□ 0.99
PDLIM1-202ENST00000477757 TEX51A0A1B0GUA7 166 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 VPS37CA5D8V6 355 aaPredicted RBP21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 ENC1O14682 589 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 CAPN9O14815 690 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 RFPL3O75679 317 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 FSBPO95073 299 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 C1SP09871 688 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 KIF11P52732 1056 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 BCAT1P54687 386 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 CLDN6P56747 220 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 COG7P83436 770 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 ARID5AQ03989 594 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 ZBTB16Q05516 673 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 TMEM245Q9H330 911 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 RASAL2Q9UJF2 1139 aa21.23■□□□□ 0.99
PDLIM1-202ENST00000477757 LRRIQ3A6PVS8 624 aaPredicted RBP21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 VILLO15195 856 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 RALAP11233 206 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 ASIC1P78348 528 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 CNNM4Q6P4Q7 775 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 GPR155Q7Z3F1 870 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 FAM217AQ8IXS0 508 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 ACE2Q9BYF1 805 aaPredicted RBP21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 CGNQ9P2M7 1197 aaKnown RBP21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 AK5Q9Y6K8 562 aa21.22■□□□□ 0.99
PDLIM1-202ENST00000477757 STX6O43752 255 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 EXOC3O60645 756 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 C4BPAP04003 597 aaKnown RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 IGHV4-34P06331 123 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 HMBSP08397 361 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 TRIM21P19474 475 aaKnown RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 ASPAP45381 313 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 ACADVLP49748 655 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 C21orf59P57076 290 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 RPS14P62263 151 aaKnown RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 RACK1P63244 317 aaKnown RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 E2F4Q16254 413 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 FNDC3BQ53EP0 1204 aaKnown RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 HES3Q5TGS1 186 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 PCSK4Q6UW60 755 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 GATAD2AQ86YP4 633 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 DENND1CQ8IV53 801 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 PARD3BQ8TEW8 1205 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 CNDP2Q96KP4 475 aaKnown RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 ELF4Q99607 663 aaPredicted RBP21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 SGK2Q9HBY8 427 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 USP3Q9Y6I4 520 aa21.21■□□□□ 0.99
PDLIM1-202ENST00000477757 HECTD1Q9ULT8 2610 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 J3QKU1 62 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 CBX4O00257 560 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 LDOC1O95751 146 aaPredicted RBP21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 DNTTP04053 509 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 HOXD9P28356 352 aaPredicted RBP21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 CEBPZQ03701 1054 aaKnown RBP21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 EHHADHQ08426 723 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 PDE4CQ08493 712 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 INCA1Q0VD86 236 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 EFEMP1Q12805 493 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 TARDBPQ13148 414 aaKnown RBP eCLIP21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 DNAJC3Q13217 504 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 SGSM1Q2NKQ1 1148 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 TTC31Q49AM3 519 aaPredicted RBP21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 ZNF366Q8N895 744 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 DDI1Q8WTU0 396 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 TWNKQ96RR1 684 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 CUEDC2Q9H467 287 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 PLXNA2O75051 1894 aa21.2■□□□□ 0.98
PDLIM1-202ENST00000477757 CAPN8A6NHC0 703 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 CFHR1Q03591 330 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 KIAA0895LQ68EN5 471 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 FAM173BQ6P4H8 233 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 FBXL19Q6PCT2 694 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 WFIKKN2Q8TEU8 576 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 TAF4BQ92750 862 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 CYFIP2Q96F07 1278 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 PRSS16Q9NQE7 514 aa21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 TFIP11Q9UBB9 837 aaKnown RBP21.19■□□□□ 0.98
PDLIM1-202ENST00000477757 ASS1P00966 412 aaKnown RBP21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 RPN1P04843 607 aaKnown RBP21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 HLA-FP30511 346 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 AMPD3Q01432 767 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 TLE3Q04726 772 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 SLC39A14Q15043 492 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 SHBQ15464 509 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 ZACNQ401N2 412 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 SAP25Q8TEE9 199 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 CYB5D2Q8WUJ1 264 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 TSC1Q92574 1164 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 GOLGA1Q92805 767 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 SLC6A18Q96N87 628 aa21.18■□□□□ 0.98
PDLIM1-202ENST00000477757 MARCH2Q9P0N8 246 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms