RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 OLA1Q9NTK5 396 aaKnown RBP18.39■□□□□ 0.53
PTPN7-209ENST00000477554 FBXO10Q9UK96 956 aa18.39■□□□□ 0.53
PTPN7-209ENST00000477554 SMG5Q9UPR3 1016 aaKnown RBP18.39■□□□□ 0.53
PTPN7-209ENST00000477554 SLC8A2Q9UPR5 921 aa18.39■□□□□ 0.53
PTPN7-209ENST00000477554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 21.9
PTPN7-209ENST00000477554 GVINP1Q7Z2Y8 2422 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 LAMA1P25391 3075 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 SDK1Q7Z5N4 2213 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 WASH3PC4AMC7 463 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 CHRNB2P17787 502 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 TFE3P19532 575 aaPredicted RBP18.38■□□□□ 0.53
PTPN7-209ENST00000477554 MEA1Q16626 185 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 OTUD1Q5VV17 481 aaPredicted RBP18.38■□□□□ 0.53
PTPN7-209ENST00000477554 TMEM215Q68D42 235 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 GRAMD4Q6IC98 578 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 OLFML1Q6UWY5 402 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 LONP2Q86WA8 852 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 FRMD1Q8N878 549 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 EPS8L1Q8TE68 723 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 SORCS1Q8WY21 1168 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 NUP58Q9BVL2 599 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 STK33Q9BYT3 514 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 LHX5Q9H2C1 402 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 NOCTQ9UK39 431 aaKnown RBP18.38■□□□□ 0.53
PTPN7-209ENST00000477554 MMP17Q9ULZ9 603 aa18.38■□□□□ 0.53
PTPN7-209ENST00000477554 HBS1LQ9Y450 684 aaKnown RBP18.38■□□□□ 0.53
PTPN7-209ENST00000477554 PTPRZ1P23471 2315 aaPredicted RBP18.37■□□□□ 0.53
PTPN7-209ENST00000477554 HOXD9P28356 352 aaPredicted RBP18.37■□□□□ 0.53
PTPN7-209ENST00000477554 ACADSBP45954 432 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 DGKGP49619 791 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 TBX4P57082 545 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 TRIM14Q14142 442 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 PRR23BQ6ZRT6 265 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 WDR5BQ86VZ2 330 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 DEFB106AQ8N104 65 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 MDGA1Q8NFP4 955 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 NEK11Q8NG66 645 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 SLC39A13Q96H72 371 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 PRICKLE1Q96MT3 831 aaPredicted RBP18.37■□□□□ 0.53
PTPN7-209ENST00000477554 NUCKS1Q9H1E3 243 aaKnown RBP18.37■□□□□ 0.53
PTPN7-209ENST00000477554 WDR35Q9P2L0 1181 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 DAAM1Q9Y4D1 1078 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 RAD54BQ9Y620 910 aa18.37■□□□□ 0.53
PTPN7-209ENST00000477554 SYNJ2BP-COX16A0A087WUM0 186 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 GOLGA6L6A8MZA4 724 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 ATG13O75143 517 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 IGLV3-25P01717 112 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 TPM1P09493 284 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 HOXA6P31267 233 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 KRT9P35527 623 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 TNFRSF4P43489 277 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 NUMBP49757 651 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 CRY1Q16526 586 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 ZC3H12AQ5D1E8 599 aaKnown RBP18.36■□□□□ 0.53
PTPN7-209ENST00000477554 FIGNQ5HY92 759 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 OR6B2Q6IFH4 312 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 ANO7Q6IWH7 933 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 TRNP1Q6NT89 227 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 KIAA1211LQ6NV74 962 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 TMC6Q7Z403 805 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 PHLDB2Q86SQ0 1253 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 CPXM2Q8N436 756 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 ZNF513Q8N8E2 541 aaPredicted RBP18.36■□□□□ 0.53
PTPN7-209ENST00000477554 DDI1Q8WTU0 396 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 CPA5Q8WXQ8 436 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 FAM126AQ9BYI3 521 aaPredicted RBP18.36■□□□□ 0.53
PTPN7-209ENST00000477554 DCLK3Q9C098 648 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 SLC6A17Q9H1V8 727 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 COX16Q9P0S2 106 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 STOML2Q9UJZ1 356 aa18.36■□□□□ 0.53
PTPN7-209ENST00000477554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 MOCS2O96007 188 aaPredicted RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 HARS2P49590 506 aaKnown RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 NRLP54845 237 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 YWHAZP63104 245 aaKnown RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 MRPS21P82921 87 aaKnown RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 FMO1Q01740 532 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 EIF4EBP2Q13542 120 aaPredicted RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 PPP2R5DQ14738 602 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 DCAF6Q58WW2 860 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 KBTBD6Q86V97 674 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 SLC2A13Q96QE2 648 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 XPO6Q96QU8 1125 aaKnown RBP18.35■□□□□ 0.53
PTPN7-209ENST00000477554 PCDHB18PQ96TA0 734 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 POPDC2Q9HBU9 364 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 CD248Q9HCU0 757 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 PARD6AQ9NPB6 346 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 CD93Q9NPY3 652 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 CACNA2D2Q9NY47 1150 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 IMPACTQ9P2X3 320 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 ZNF510Q9Y2H8 683 aa18.35■□□□□ 0.53
PTPN7-209ENST00000477554 A0A1W2PQF6 199 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 IRAK2O43187 625 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 GJB6O95452 261 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
PTPN7-209ENST00000477554 HLA-FP30511 346 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 CDH5P33151 784 aaPredicted RBP18.34■□□□□ 0.53
PTPN7-209ENST00000477554 SOX5P35711 763 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 CHKAP35790 457 aa18.34■□□□□ 0.53
PTPN7-209ENST00000477554 GGCXP38435 758 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms