RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 MCM3P25205 808 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 TBX4P57082 545 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 BYSLQ13895 437 aaKnown RBP29.87■■■□□ 2.37
VEGFA-211ENST00000476772 C1orf228Q6PIY5 440 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 CCDC149Q6ZUS6 474 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 MIB1Q86YT6 1006 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 ATL2Q8NHH9 583 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 SLC35B2Q8TB61 432 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 FCRL2Q96LA5 508 aaPredicted RBP29.87■■■□□ 2.37
VEGFA-211ENST00000476772 TRPM5Q9NZQ8 1165 aa29.87■■■□□ 2.37
VEGFA-211ENST00000476772 BHMG1C9JSJ3 638 aaPredicted RBP29.86■■■□□ 2.37
VEGFA-211ENST00000476772 TGM2P21980 687 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 GGCXP38435 758 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 CLCN4P51793 760 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 VCPP55072 806 aaKnown RBP29.86■■■□□ 2.37
VEGFA-211ENST00000476772 NNTQ13423 1086 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 ITIH5Q86UX2 942 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 IFT20Q8IY31 132 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 GRK7Q8WTQ7 553 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 CASKIN2Q8WXE0 1202 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 PBX4Q9BYU1 374 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 FRMD8P1Q9BZ68 369 aaPredicted RBP29.86■■■□□ 2.37
VEGFA-211ENST00000476772 ZNF334Q9HCZ1 680 aaPredicted RBP29.86■■■□□ 2.37
VEGFA-211ENST00000476772 ARHGEF4Q9NR80 690 aa29.86■■■□□ 2.37
VEGFA-211ENST00000476772 UTP11Q9Y3A2 253 aaKnown RBP29.86■■■□□ 2.37
VEGFA-211ENST00000476772 KCNU1A8MYU2 1149 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 GPM6BQ13491 265 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 TRADDQ15628 312 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 OASLQ15646 514 aaKnown RBP29.85■■■□□ 2.37
VEGFA-211ENST00000476772 TRIP4Q15650 581 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-211ENST00000476772 ZNF276Q8N554 614 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 P3H4Q92791 437 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 NKD2Q969F2 451 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-211ENST00000476772 CDK5RAP1Q96SZ6 601 aaKnown RBP29.85■■■□□ 2.37
VEGFA-211ENST00000476772 RAB17Q9H0T7 212 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 CERS4Q9HA82 394 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 ETNK2Q9NVF9 386 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 TMEM51Q9NW97 253 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 ARGLU1Q9NWB6 273 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-211ENST00000476772 UXTQ9UBK9 157 aaPredicted RBP29.85■■■□□ 2.37
VEGFA-211ENST00000476772 OR12D3Q9UGF7 316 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 PAGE1O75459 146 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 LRG1P02750 347 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 BRD3Q15059 726 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 NOMO1Q15155 1222 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 RFX8Q6ZV50 586 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 TNS4Q8IZW8 715 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 HAPLN3Q96S86 360 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 OSBPL2Q9H1P3 480 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 MFHAS1Q9Y4C4 1052 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 ASB3Q9Y575 518 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 CEP290O15078 2479 aa29.85■■■□□ 2.37
VEGFA-211ENST00000476772 SLC12A8A0AV02 714 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 CCDC151A5D8V7 595 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 H3BNC9 293 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 MOCS2O96007 188 aaPredicted RBP29.84■■■□□ 2.37
VEGFA-211ENST00000476772 MYBL2P10244 700 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 TPI1P60174 286 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 DPYSQ14117 519 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 HECTD3Q5T447 861 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 NCBP2-AS2Q69YL0 99 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 CCNI2Q6ZMN8 369 aaPredicted RBP29.84■■■□□ 2.37
VEGFA-211ENST00000476772 GSPT2Q8IYD1 628 aaKnown RBP29.84■■■□□ 2.37
VEGFA-211ENST00000476772 ERP44Q9BS26 406 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 TRIM31Q9BZY9 425 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 NKX2-4Q9H2Z4 354 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 FEZ2Q9UHY8 353 aaPredicted RBP29.84■■■□□ 2.37
VEGFA-211ENST00000476772 XPO7Q9UIA9 1087 aaKnown RBP29.84■■■□□ 2.37
VEGFA-211ENST00000476772 ZNF148Q9UQR1 794 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 HEY1Q9Y5J3 304 aa29.84■■■□□ 2.37
VEGFA-211ENST00000476772 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 ZFXP17010 805 aaPredicted RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 TNFRSF8P28908 595 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 ATP5C1P36542 298 aaKnown RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 CLCN6P51797 869 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 EIF3EP60228 445 aaKnown RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 PPP1R7Q15435 360 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 TADA2BQ86TJ2 420 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 EPAS1Q99814 870 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 SIK2Q9H0K1 926 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 DPH5Q9H2P9 285 aa29.83■■■□□ 2.37
VEGFA-211ENST00000476772 DRG1Q9Y295 367 aaKnown RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 MTCL1Q9Y4B5 1905 aaKnown RBP29.83■■■□□ 2.37
VEGFA-211ENST00000476772 MCF2LO15068 1137 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 HMBSP08397 361 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 SLC2A3P11169 496 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 CARSP49589 748 aaKnown RBP29.82■■■□□ 2.36
VEGFA-211ENST00000476772 DUPD1Q68J44 220 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 TMEM150AQ86TG1 271 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 DDX42Q86XP3 938 aaKnown RBP eCLIP29.82■■■□□ 2.362e-9■■■■□ 19.4
VEGFA-211ENST00000476772 IFT81Q8WYA0 676 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 SEC14L1Q92503 715 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 DNMT3LQ9UJW3 386 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 ANAPC1Q9H1A4 1944 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 H0YGN5 161 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 DAPK3O43293 454 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 COCHO43405 550 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 LRIG2O94898 1065 aa29.82■■■□□ 2.36
VEGFA-211ENST00000476772 GAS8O95995 478 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms